| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231541
Identifier: 17231541
GI number: 17231541
Start: 4874846
End: 4875391
Strand: Reverse
Name: 17231541
Synonym: all4049
Alternate gene names: NA
Gene position: 4875391-4874846 (Counterclockwise)
Preceding gene: 17231542
Following gene: 17231539
Centisome position: 76.01
GC content: 41.21
Gene sequence:
>546_bases ATGTCCGATAATTTAGCCGCAGAAATACCAATTCACCAACCAATAACTGATAATTCAAGTGAGCAAAACAATCACCATAT AATTGAGGAAGAGAAGAACATTCGCTTACTGGAAGAAAGGCTCTTAGTTGATATAAGTAGGCAGAAAATTGGTGAGGTCG TTGTCCGTAAGGTAATCGAAACTCAGATGGTGCAAGTTCCTGTACGGCGCGAAAAGCTGATTGTGGAACAAATAGGCCCA GAACACAAGCAACTTGCAGAGATCGATTTAAGCCAAGGTGAGATTACTGGCATTGAATTAGCTCAAAATGCTAGCCACGA ACTACGAGGTTGGAATGGTGGTTTAACGGTAAGTGGTAGCTTTAGCTCTCCTAAAATTGCTAGTTTATTATTAAATGCGA TCGCTCTAGAACGCAAACATGGTTGTCAACAGGTACGAGTCTCTATTGTTGTTGAAGACGAAGAACACCAAAAGAAATAC CAAGAGTGGTTTGACCGTTGCTCTCATGGTCAGCTATCAAAACACGAAAAATCGGCTGATACCTAG
Upstream 100 bases:
>100_bases TCGTCCTAATGCAGTACAGGTAAGTAAGGCTTTTTATTATCAATATTAGCTTTACCTGTACTTGTAATAACTCTAGAGAT AAGTTTTAAAAGTAGATTAT
Downstream 100 bases:
>100_bases TACCGGAAGTCAAAAGTCAATACTTTATGTAAATGCGTAATGGGTAACTAATCAACTAATTACCCATTATGCTTTACCAA TTACGAATTATTTTGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSDNLAAEIPIHQPITDNSSEQNNHHIIEEEKNIRLLEERLLVDISRQKIGEVVVRKVIETQMVQVPVRREKLIVEQIGP EHKQLAEIDLSQGEITGIELAQNASHELRGWNGGLTVSGSFSSPKIASLLLNAIALERKHGCQQVRVSIVVEDEEHQKKY QEWFDRCSHGQLSKHEKSADT
Sequences:
>Translated_181_residues MSDNLAAEIPIHQPITDNSSEQNNHHIIEEEKNIRLLEERLLVDISRQKIGEVVVRKVIETQMVQVPVRREKLIVEQIGP EHKQLAEIDLSQGEITGIELAQNASHELRGWNGGLTVSGSFSSPKIASLLLNAIALERKHGCQQVRVSIVVEDEEHQKKY QEWFDRCSHGQLSKHEKSADT >Mature_180_residues SDNLAAEIPIHQPITDNSSEQNNHHIIEEEKNIRLLEERLLVDISRQKIGEVVVRKVIETQMVQVPVRREKLIVEQIGPE HKQLAEIDLSQGEITGIELAQNASHELRGWNGGLTVSGSFSSPKIASLLLNAIALERKHGCQQVRVSIVVEDEEHQKKYQ EWFDRCSHGQLSKHEKSADT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20505; Mature: 20374
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNLAAEIPIHQPITDNSSEQNNHHIIEEEKNIRLLEERLLVDISRQKIGEVVVRKVIE CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQMVQVPVRREKLIVEQIGPEHKQLAEIDLSQGEITGIELAQNASHELRGWNGGLTVSGS HHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEHHHHHCCCCHHCCCCCCCEEEECC FSSPKIASLLLNAIALERKHGCQQVRVSIVVEDEEHQKKYQEWFDRCSHGQLSKHEKSAD CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCC T C >Mature Secondary Structure SDNLAAEIPIHQPITDNSSEQNNHHIIEEEKNIRLLEERLLVDISRQKIGEVVVRKVIE CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQMVQVPVRREKLIVEQIGPEHKQLAEIDLSQGEITGIELAQNASHELRGWNGGLTVSGS HHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEHHHHHCCCCHHCCCCCCCEEEECC FSSPKIASLLLNAIALERKHGCQQVRVSIVVEDEEHQKKYQEWFDRCSHGQLSKHEKSAD CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA