| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231530
Identifier: 17231530
GI number: 17231530
Start: 4865708
End: 4866196
Strand: Reverse
Name: 17231530
Synonym: all4038
Alternate gene names: NA
Gene position: 4866196-4865708 (Counterclockwise)
Preceding gene: 17231531
Following gene: 17231529
Centisome position: 75.87
GC content: 44.99
Gene sequence:
>489_bases ATGAAAGATTGTCGCCCTCGACTTCACTGGCGAGGCGGTTGGCTGTTGGCTATAGTCACTACCGTCATTACGACACCTGT CATCGCTCAGACAGCTAATTTTGCCACACTTCATCTATCACCAGGGTTTGAACCGGCAAAGGGGAAAGTTTCCGGTTATA CGGGTGGCTCTTATTCATTGTCTGCCATTAGTAACCGCGATCGCTCAAGAAAACCCTGCATTGGCTTTGCTGACCCTAAG CCGGATCACATTATGGTTTTGGAAAAGGACTTTCCTCGCCTGAAATTATTCATCAATAGTGGCGGGAAAGATACTACTTT ATTAATTCAAGGACCAGACGACACCACAATTCGCTGTGGTGATGATACAGGAAAGAGTAAAGACGCTAGCATTGACGATA TCGACTGGAAAACTGGAACCTATCGAATTTGGATAGGTAAATTCCACTCTGGAGTCAAAACTAACTACACTTTGACTGTA CAGCAATAG
Upstream 100 bases:
>100_bases TCAAAGGTTTCACAAACTGTTTATATTTTTCCGAAACTTTTTTAATAGAATATGTATATACCATTACTAAACTATTATTA GAGCCTGTTGGAGGGCTGCT
Downstream 100 bases:
>100_bases CTTGGGAACTGGAAGAGGCAGGAGAAGCAGGGGAGAAAACATTTACTTTATCCCCAATACCCAATACCCAATACCCAATC CCTATTAAAGATATTATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKDCRPRLHWRGGWLLAIVTTVITTPVIAQTANFATLHLSPGFEPAKGKVSGYTGGSYSLSAISNRDRSRKPCIGFADPK PDHIMVLEKDFPRLKLFINSGGKDTTLLIQGPDDTTIRCGDDTGKSKDASIDDIDWKTGTYRIWIGKFHSGVKTNYTLTV QQ
Sequences:
>Translated_162_residues MKDCRPRLHWRGGWLLAIVTTVITTPVIAQTANFATLHLSPGFEPAKGKVSGYTGGSYSLSAISNRDRSRKPCIGFADPK PDHIMVLEKDFPRLKLFINSGGKDTTLLIQGPDDTTIRCGDDTGKSKDASIDDIDWKTGTYRIWIGKFHSGVKTNYTLTV QQ >Mature_162_residues MKDCRPRLHWRGGWLLAIVTTVITTPVIAQTANFATLHLSPGFEPAKGKVSGYTGGSYSLSAISNRDRSRKPCIGFADPK PDHIMVLEKDFPRLKLFINSGGKDTTLLIQGPDDTTIRCGDDTGKSKDASIDDIDWKTGTYRIWIGKFHSGVKTNYTLTV QQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17885; Mature: 17885
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDCRPRLHWRGGWLLAIVTTVITTPVIAQTANFATLHLSPGFEPAKGKVSGYTGGSYSL CCCCCCCEEECCCCHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCEECEECCCCEEE SAISNRDRSRKPCIGFADPKPDHIMVLEKDFPRLKLFINSGGKDTTLLIQGPDDTTIRCG EEECCCCCCCCCEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEC DDTGKSKDASIDDIDWKTGTYRIWIGKFHSGVKTNYTLTVQQ CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEC >Mature Secondary Structure MKDCRPRLHWRGGWLLAIVTTVITTPVIAQTANFATLHLSPGFEPAKGKVSGYTGGSYSL CCCCCCCEEECCCCHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCEECEECCCCEEE SAISNRDRSRKPCIGFADPKPDHIMVLEKDFPRLKLFINSGGKDTTLLIQGPDDTTIRCG EEECCCCCCCCCEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEC DDTGKSKDASIDDIDWKTGTYRIWIGKFHSGVKTNYTLTVQQ CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA