| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231528
Identifier: 17231528
GI number: 17231528
Start: 4864109
End: 4864693
Strand: Direct
Name: 17231528
Synonym: alr4036
Alternate gene names: NA
Gene position: 4864109-4864693 (Clockwise)
Preceding gene: 17231525
Following gene: 17231535
Centisome position: 75.84
GC content: 47.69
Gene sequence:
>585_bases ATGTCTCTAGCTCCTTGGCGAAGCGCGATCGCCCATGCTCTCCATTGTAACCGCAGCCTAGTTTACTCCCACTACTTACA ACTAGCCACAGTCAAAGCAAACGGTCATCCAGCTAACCGGACTATCGTATTTCGCGGTTTTTTGGCAGACACCAACCAAC TCAAATTTATCACCGATGCTCGTAGTGAGAAAATCGACCAGATACAGCATCAACCTTGGGCAGAAGCTTGTTGGTATTTT CCCAATACCAGAGAGCAGTTTCGCATCACCGGACAATTAACTTTAGTGGCAAGTGATGAATCTCATCCTCATCTCCAACC AGCCCGGATTAGCACTTGGCAAGAACTGAGTGATGCTGCACGCTTACAATTTGCTTGGCCTCACCCTAGCCAACCAAGAG GGGAGGATCAGGCGGCCTTTAACCCACCGCCACCAAATCCCCAGCAACCAATACCTAATTTTTGCCTACTACTATTGGAA CCCACCCAGATAGACCATTTGGAATTACGAGGTGAACCACAAAACCGTTATCTTTATCGTCGTGATCATAACCAAGAGTG GACCATCCAAGGTGTTAACCCATAA
Upstream 100 bases:
>100_bases ATCACACACCTTACGATAAATCTGACATTAGCTGATCGCCATCAAACTTAATTAACCAAGCAAAAGAGTAATATAAATTA CGAATTATAAATTATTTAGT
Downstream 100 bases:
>100_bases TCGGGAGCGCTGAACCCTGAGTCAAGTCGCTTTGCTCCAATTCAAAATACTCTACGAGACGCTACGCGTTGGCGGTTAGC TTCTCGTAAGAGATGCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Pyridoxamine Phosphate Oxidase
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSLAPWRSAIAHALHCNRSLVYSHYLQLATVKANGHPANRTIVFRGFLADTNQLKFITDARSEKIDQIQHQPWAEACWYF PNTREQFRITGQLTLVASDESHPHLQPARISTWQELSDAARLQFAWPHPSQPRGEDQAAFNPPPPNPQQPIPNFCLLLLE PTQIDHLELRGEPQNRYLYRRDHNQEWTIQGVNP
Sequences:
>Translated_194_residues MSLAPWRSAIAHALHCNRSLVYSHYLQLATVKANGHPANRTIVFRGFLADTNQLKFITDARSEKIDQIQHQPWAEACWYF PNTREQFRITGQLTLVASDESHPHLQPARISTWQELSDAARLQFAWPHPSQPRGEDQAAFNPPPPNPQQPIPNFCLLLLE PTQIDHLELRGEPQNRYLYRRDHNQEWTIQGVNP >Mature_193_residues SLAPWRSAIAHALHCNRSLVYSHYLQLATVKANGHPANRTIVFRGFLADTNQLKFITDARSEKIDQIQHQPWAEACWYFP NTREQFRITGQLTLVASDESHPHLQPARISTWQELSDAARLQFAWPHPSQPRGEDQAAFNPPPPNPQQPIPNFCLLLLEP TQIDHLELRGEPQNRYLYRRDHNQEWTIQGVNP
Specific function: Unknown
COG id: COG5135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22411; Mature: 22280
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAPWRSAIAHALHCNRSLVYSHYLQLATVKANGHPANRTIVFRGFLADTNQLKFITDA CCCCHHHHHHHHHHHCCCHHHHHHEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECC RSEKIDQIQHQPWAEACWYFPNTREQFRITGQLTLVASDESHPHLQPARISTWQELSDAA HHHHHHHHHCCCCHHHEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH RLQFAWPHPSQPRGEDQAAFNPPPPNPQQPIPNFCLLLLEPTQIDHLELRGEPQNRYLYR EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEE RDHNQEWTIQGVNP ECCCCEEEEEECCC >Mature Secondary Structure SLAPWRSAIAHALHCNRSLVYSHYLQLATVKANGHPANRTIVFRGFLADTNQLKFITDA CCCHHHHHHHHHHHCCCHHHHHHEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECC RSEKIDQIQHQPWAEACWYFPNTREQFRITGQLTLVASDESHPHLQPARISTWQELSDAA HHHHHHHHHCCCCHHHEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH RLQFAWPHPSQPRGEDQAAFNPPPPNPQQPIPNFCLLLLEPTQIDHLELRGEPQNRYLYR EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEE RDHNQEWTIQGVNP ECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA