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The map label for this gene is yrbE [C]

Identifier: 17231507

GI number: 17231507

Start: 4834564

End: 4835355

Strand: Direct

Name: yrbE [C]

Synonym: alr4015

Alternate gene names: 17231507

Gene position: 4834564-4835355 (Clockwise)

Preceding gene: 17231503

Following gene: 17231508

Centisome position: 75.38

GC content: 44.19

Gene sequence:

>792_bases
ATGACCACATCCAAATCCAGCATAGGAACATGGAGTCAGCGATTGCTGGCAGCAATATTTCTGGGTGGACAAGCTATAGT
TCACCTCTTGAGGGGTAAAATCCACTGGCGCAACACCAAAGAACAAATGGCAGCAGTGGGGCCAGATTCGTTATTTATTG
CCCTATTAACAGCAGTTTTTGTTGGTGCAGTTTTTACCATTCAGGTAGCACGGGAGTTTATTAATTTTGGCGCAGGTAAT
CTTGTCGGCGGAGTGTTAGCAGTAGCATTGACGAGGGAATTATCGCCAGTACTAACAGCCGTGATATTAGCCGGACGTGT
TGGTTCTGCTTTTGCCGCAGAAATCGGCACAATGCGGGTAACAGAACAAATCGATGCCATGTTGATGTTAAAAACTGACC
CAATTGACTATTTAGTTATACCCCGTCTGCTGGCTTGCTTCCTCATGCTGCCAATTTTAACCCTCCTATCCTTAGTCACA
GGAATGTTAGGGGGATTAATCATTGCCACAAATATGTATGGAATCTCCGACACAGTATTTTTAGATTCCGCCCGTAACTT
ACTAGAAATCTGGGATATTTGTAGCGCCATGATTAAGGCGTGCTGCTTTGGGGTATTAATTGCCATTATTGGTTGTAGTT
GGGGTTTGACCACCACAGGTGGAGCTAAAGGAGTAGGACAATCGACTACAACGGCTGTTGTTACGGCCTTATTAATTATC
TTCGTTAGTAACTTTTTCTTATCCTGGGTAATGTTTCAAGGAACTGGTGGTGCATTCCAGCCAGGGATATAA

Upstream 100 bases:

>100_bases
GGGAAAATAATTGTTGACTGTTGATTGTTGACTGTTGACTATGGACTATGTACAGATGTTGCAGTGTAACGTCTCCAATG
ATGGAAATGAATAATAACTA

Downstream 100 bases:

>100_bases
GGATAGGGAGTGGATAGTCGGAAAAATTAATGTACAGACGTTGTATACAACATCTCTTCTCATGACCAATGACAACTGAC
TGTTGACTAAACTCCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTTSKSSIGTWSQRLLAAIFLGGQAIVHLLRGKIHWRNTKEQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGN
LVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVT
GMLGGLIIATNMYGISDTVFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLII
FVSNFFLSWVMFQGTGGAFQPGI

Sequences:

>Translated_263_residues
MTTSKSSIGTWSQRLLAAIFLGGQAIVHLLRGKIHWRNTKEQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGN
LVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVT
GMLGGLIIATNMYGISDTVFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLII
FVSNFFLSWVMFQGTGGAFQPGI
>Mature_262_residues
TTSKSSIGTWSQRLLAAIFLGGQAIVHLLRGKIHWRNTKEQMAAVGPDSLFIALLTAVFVGAVFTIQVAREFINFGAGNL
VGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTMRVTEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVTG
MLGGLIIATNMYGISDTVFLDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLIIF
VSNFFLSWVMFQGTGGAFQPGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=236, Percent_Identity=31.7796610169492, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27823; Mature: 27691

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TTSKSSIGTWSQRLLAAIFLGGQAIVHLLRGKIHWRNTKEQMAAVGPDSLFIALLTAVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHCCCHHHHHHHHHHHH
VGAVFTIQVAREFINFGAGNLVGGVLAVALTRELSPVLTAVILAGRVGSAFAAEIGTMRV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TEQIDAMLMLKTDPIDYLVIPRLLACFLMLPILTLLSLVTGMLGGLIIATNMYGISDTVF
HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LDSARNLLEIWDICSAMIKACCFGVLIAIIGCSWGLTTTGGAKGVGQSTTTAVVTALLII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FVSNFFLSWVMFQGTGGAFQPGI
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]