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The map label for this gene is yddW [H]

Identifier: 17231425

GI number: 17231425

Start: 4748153

End: 4750378

Strand: Reverse

Name: yddW [H]

Synonym: all3933

Alternate gene names: 17231425

Gene position: 4750378-4748153 (Counterclockwise)

Preceding gene: 17231431

Following gene: 17231421

Centisome position: 74.07

GC content: 44.29

Gene sequence:

>2226_bases
ATGCCAATTGAATTCCAACCCCAAAGCATTCGAGTTAACACTTGGTTAACTAAGTTATTATCCATACCTAAAAAATTGCT
TTTTGTTCTTCAAGGTTGGCGGTCAATTAAGCGACTTCTTCCAGTCTTGTTTGCACTGTCATTTACCACAGTACTGTTAC
TACAAAACCTCACGCCAGCAACGGCTCAATTTTTCCAATCACCACGCCAAGAAATTCGGGGAGTTTGGCTAACAAATAAT
GACTTTGACATCCTCAGAAATCGCGCTAAAGTGCAGGACACACTTGCTCAATTGCGGCGGTTGAACTTTAATACAATTTA
TCCTGTTGTTTGGAACGATGGCTATACCAAGTATCCCAGTGCTGTCACCCAACGCATGGGCATTCCTTATTTCTTTCGAG
GGACAGAAGGGCAAGACGTAATTGCAGACATTATTAGTCAAGCGCGTAGTCAAGGTTTACTAGCTATACCTTGGTTCGAG
TTTGGTTTTATGGCTCCCTTAACTTCCGAACTAGCATCCCAGCATCCAGATTGGCTAACGCAAAAGCGGGATGGAACCCA
AACCTCCATTAGTGCTGCGGGTGAAGTAGCTTGGATGAATCCCTTCCACCCAGAAGTACAGCAGTTTATTACTGACCTGG
TAGTAGAAATCATTACCAAATACAACGCTGATGGGATTCAATTTGATGACCACATGAGTTTACCCGTTGATTTTGGGTAT
GACAAATACACAATTAATCTGTATAGACAGGAAACTGGGAATCCGCCGCCGTCTAATCCTCAAGCCCAAGCATGGGTCAA
ATGGCGGGCCGATAAAATTACAGCTTTCATGGTGCAACTAAATCAAGCTGTGAAAGCCAGAAAACCCAATGCCATTTTTG
CGGTTTCGCCTAATTACTATGACTTTGCATACAAATTGCAACTACAAGATTGGCTCAACTGGGTCAGGTTGGGTGTTGTA
GATGAGTTAGTCGTCCAGGTTTACCGGAATGATTTGCAAAGTTTTAATAGTAAACTCATCACTCCAGAAATTATCGAAAC
ACAGCAATTAATACCTACTGGTATAGGTATTATGACTGGCTTAAGAAATCGCCAAGTTTCCATGTCACAAATTCAGTCGC
AAGTCAGGGCAGCACAAGAACGTGGCTTGGGAGCGGTTTTTTTCTACTACGAAAGCCTTTGGGACTATGCACCAGAACCA
GTGGCGCAACGACAGGCTTCTTTTCAACAACTGTTTCCCAATCCGGCTAGGCGTGATACTTCTCAAATCACAGCCCGAAA
GCCCAGTTTTAATACTATCTCAGTTCCCTTATATACAAAAGGTTCTGTCGGTCAACGAGAGCGGGGTTATTTTCTCGAAC
TAGCAGTTGCTGGTGGTCAGCCAAGGCGTGTTCTGATGGATACAGGCTCTGGGGGGCTGAGAGTGCCGAGAGAGTTTTTA
GGCAATGCCCCTATCACTAGAACTGGTCAGATAGTCAGAGAAGTGCTAAACGATGGCACTATCCTCGAAGGAGAGTTAGT
TTACACAAGTATGCGTATTGGGTTAATTGCCACTGAAGAACCTGTGCCGGTGCAAGTTGTCACCAGTCGCCAATGTATAG
CCCAAAAACCTAATTGTTCTGCCAGAGGTAACACACCATTCTCTGGTATTATCGGTGTCAACTATGCAGAGCGCTCACTG
CCCTACAATCCTTTCAGAAAACTACCAGGGAATTTAAGTAACGGATTCATTATTGCAGGCGATCGCGCTAGTGGTAACAG
TAGCCTCATCCTGGGTTTAACAGCACCGAATCGAGGCGGGTTCAATCTAGCTTCCCTGACTCAACAACCCGTGATGAATA
GTATTCCAGGAAACAGATGGGACTCTAGACTCAACGGAGTTTGTTTAACTATTTCTGGCAGTGCTATGAAAAATACCTGT
AATGCCAAAATGATAGCGGATACTGGCATAATCAGTAGTTTTATTGACTTCAAGTCTGCTTCCCTCATGGGTAAACTAAA
ACCCGGCAGGTTGAACCCAAAAAACACACTCAAGTTATCCATTCCTCGCATCTTTGACTACAGCCTCACCCCAGGAAATC
GCAACGGGTTAAATGTATGGAATCTCCATGTGTCACCACAGCTAGATCAAGCTATGGTTGTGAATAGTGGCATAGCACTT
TTTGACCGATACAATGTACTTTTTGACCCGGTGAATGGACGGGAAGGTTTTCGTCCTCGCAGTTAA

Upstream 100 bases:

>100_bases
AAATCTTCAAGTCCTGACTAAAAACTATGTAGCGCAGCAATCAATAGATTGTTGCCTTGAATCAAAATATTCCCAATTAA
GCATCAATTTTGAGCCAGTA

Downstream 100 bases:

>100_bases
GTAGAGATTTGGTAATTGGTAATTGTGTAAGGCCATTACCAATTACCTACCAAAGACCGGAAATACTATAAGTTTTCAAG
CACAGATGATACTATTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 741; Mature: 740

Protein sequence:

>741_residues
MPIEFQPQSIRVNTWLTKLLSIPKKLLFVLQGWRSIKRLLPVLFALSFTTVLLLQNLTPATAQFFQSPRQEIRGVWLTNN
DFDILRNRAKVQDTLAQLRRLNFNTIYPVVWNDGYTKYPSAVTQRMGIPYFFRGTEGQDVIADIISQARSQGLLAIPWFE
FGFMAPLTSELASQHPDWLTQKRDGTQTSISAAGEVAWMNPFHPEVQQFITDLVVEIITKYNADGIQFDDHMSLPVDFGY
DKYTINLYRQETGNPPPSNPQAQAWVKWRADKITAFMVQLNQAVKARKPNAIFAVSPNYYDFAYKLQLQDWLNWVRLGVV
DELVVQVYRNDLQSFNSKLITPEIIETQQLIPTGIGIMTGLRNRQVSMSQIQSQVRAAQERGLGAVFFYYESLWDYAPEP
VAQRQASFQQLFPNPARRDTSQITARKPSFNTISVPLYTKGSVGQRERGYFLELAVAGGQPRRVLMDTGSGGLRVPREFL
GNAPITRTGQIVREVLNDGTILEGELVYTSMRIGLIATEEPVPVQVVTSRQCIAQKPNCSARGNTPFSGIIGVNYAERSL
PYNPFRKLPGNLSNGFIIAGDRASGNSSLILGLTAPNRGGFNLASLTQQPVMNSIPGNRWDSRLNGVCLTISGSAMKNTC
NAKMIADTGIISSFIDFKSASLMGKLKPGRLNPKNTLKLSIPRIFDYSLTPGNRNGLNVWNLHVSPQLDQAMVVNSGIAL
FDRYNVLFDPVNGREGFRPRS

Sequences:

>Translated_741_residues
MPIEFQPQSIRVNTWLTKLLSIPKKLLFVLQGWRSIKRLLPVLFALSFTTVLLLQNLTPATAQFFQSPRQEIRGVWLTNN
DFDILRNRAKVQDTLAQLRRLNFNTIYPVVWNDGYTKYPSAVTQRMGIPYFFRGTEGQDVIADIISQARSQGLLAIPWFE
FGFMAPLTSELASQHPDWLTQKRDGTQTSISAAGEVAWMNPFHPEVQQFITDLVVEIITKYNADGIQFDDHMSLPVDFGY
DKYTINLYRQETGNPPPSNPQAQAWVKWRADKITAFMVQLNQAVKARKPNAIFAVSPNYYDFAYKLQLQDWLNWVRLGVV
DELVVQVYRNDLQSFNSKLITPEIIETQQLIPTGIGIMTGLRNRQVSMSQIQSQVRAAQERGLGAVFFYYESLWDYAPEP
VAQRQASFQQLFPNPARRDTSQITARKPSFNTISVPLYTKGSVGQRERGYFLELAVAGGQPRRVLMDTGSGGLRVPREFL
GNAPITRTGQIVREVLNDGTILEGELVYTSMRIGLIATEEPVPVQVVTSRQCIAQKPNCSARGNTPFSGIIGVNYAERSL
PYNPFRKLPGNLSNGFIIAGDRASGNSSLILGLTAPNRGGFNLASLTQQPVMNSIPGNRWDSRLNGVCLTISGSAMKNTC
NAKMIADTGIISSFIDFKSASLMGKLKPGRLNPKNTLKLSIPRIFDYSLTPGNRNGLNVWNLHVSPQLDQAMVVNSGIAL
FDRYNVLFDPVNGREGFRPRS
>Mature_740_residues
PIEFQPQSIRVNTWLTKLLSIPKKLLFVLQGWRSIKRLLPVLFALSFTTVLLLQNLTPATAQFFQSPRQEIRGVWLTNND
FDILRNRAKVQDTLAQLRRLNFNTIYPVVWNDGYTKYPSAVTQRMGIPYFFRGTEGQDVIADIISQARSQGLLAIPWFEF
GFMAPLTSELASQHPDWLTQKRDGTQTSISAAGEVAWMNPFHPEVQQFITDLVVEIITKYNADGIQFDDHMSLPVDFGYD
KYTINLYRQETGNPPPSNPQAQAWVKWRADKITAFMVQLNQAVKARKPNAIFAVSPNYYDFAYKLQLQDWLNWVRLGVVD
ELVVQVYRNDLQSFNSKLITPEIIETQQLIPTGIGIMTGLRNRQVSMSQIQSQVRAAQERGLGAVFFYYESLWDYAPEPV
AQRQASFQQLFPNPARRDTSQITARKPSFNTISVPLYTKGSVGQRERGYFLELAVAGGQPRRVLMDTGSGGLRVPREFLG
NAPITRTGQIVREVLNDGTILEGELVYTSMRIGLIATEEPVPVQVVTSRQCIAQKPNCSARGNTPFSGIIGVNYAERSLP
YNPFRKLPGNLSNGFIIAGDRASGNSSLILGLTAPNRGGFNLASLTQQPVMNSIPGNRWDSRLNGVCLTISGSAMKNTCN
AKMIADTGIISSFIDFKSASLMGKLKPGRLNPKNTLKLSIPRIFDYSLTPGNRNGLNVWNLHVSPQLDQAMVVNSGIALF
DRYNVLFDPVNGREGFRPRS

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=319, Percent_Identity=26.6457680250784, Blast_Score=81, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 83048; Mature: 82917

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIEFQPQSIRVNTWLTKLLSIPKKLLFVLQGWRSIKRLLPVLFALSFTTVLLLQNLTPA
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TAQFFQSPRQEIRGVWLTNNDFDILRNRAKVQDTLAQLRRLNFNTIYPVVWNDGYTKYPS
HHHHHHCHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCH
AVTQRMGIPYFFRGTEGQDVIADIISQARSQGLLAIPWFEFGFMAPLTSELASQHPDWLT
HHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCHHH
QKRDGTQTSISAAGEVAWMNPFHPEVQQFITDLVVEIITKYNADGIQFDDHMSLPVDFGY
CCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEECCC
DKYTINLYRQETGNPPPSNPQAQAWVKWRADKITAFMVQLNQAVKARKPNAIFAVSPNYY
CEEEEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE
DFAYKLQLQDWLNWVRLGVVDELVVQVYRNDLQSFNSKLITPEIIETQQLIPTGIGIMTG
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHC
LRNRQVSMSQIQSQVRAAQERGLGAVFFYYESLWDYAPEPVAQRQASFQQLFPNPARRDT
CCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
SQITARKPSFNTISVPLYTKGSVGQRERGYFLELAVAGGQPRRVLMDTGSGGLRVPREFL
HHHEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHH
GNAPITRTGQIVREVLNDGTILEGELVYTSMRIGLIATEEPVPVQVVTSRQCIAQKPNCS
CCCCCCHHHHHHHHHHCCCCEEECEEEEEEEEEEEEECCCCCCEEEECCCHHHCCCCCCC
ARGNTPFSGIIGVNYAERSLPYNPFRKLPGNLSNGFIIAGDRASGNSSLILGLTAPNRGG
CCCCCCCCCEEECCCHHHCCCCCHHHHCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCC
FNLASLTQQPVMNSIPGNRWDSRLNGVCLTISGSAMKNTCNAKMIADTGIISSFIDFKSA
CCHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECHHHHCCCCCEEEEHHHHHHHHHHHHHH
SLMGKLKPGRLNPKNTLKLSIPRIFDYSLTPGNRNGLNVWNLHVSPQLDQAMVVNSGIAL
HHHCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEECCCEEE
FDRYNVLFDPVNGREGFRPRS
EECCCEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PIEFQPQSIRVNTWLTKLLSIPKKLLFVLQGWRSIKRLLPVLFALSFTTVLLLQNLTPA
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TAQFFQSPRQEIRGVWLTNNDFDILRNRAKVQDTLAQLRRLNFNTIYPVVWNDGYTKYPS
HHHHHHCHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCH
AVTQRMGIPYFFRGTEGQDVIADIISQARSQGLLAIPWFEFGFMAPLTSELASQHPDWLT
HHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCHHH
QKRDGTQTSISAAGEVAWMNPFHPEVQQFITDLVVEIITKYNADGIQFDDHMSLPVDFGY
CCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEECCC
DKYTINLYRQETGNPPPSNPQAQAWVKWRADKITAFMVQLNQAVKARKPNAIFAVSPNYY
CEEEEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE
DFAYKLQLQDWLNWVRLGVVDELVVQVYRNDLQSFNSKLITPEIIETQQLIPTGIGIMTG
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHC
LRNRQVSMSQIQSQVRAAQERGLGAVFFYYESLWDYAPEPVAQRQASFQQLFPNPARRDT
CCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
SQITARKPSFNTISVPLYTKGSVGQRERGYFLELAVAGGQPRRVLMDTGSGGLRVPREFL
HHHEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHH
GNAPITRTGQIVREVLNDGTILEGELVYTSMRIGLIATEEPVPVQVVTSRQCIAQKPNCS
CCCCCCHHHHHHHHHHCCCCEEECEEEEEEEEEEEEECCCCCCEEEECCCHHHCCCCCCC
ARGNTPFSGIIGVNYAERSLPYNPFRKLPGNLSNGFIIAGDRASGNSSLILGLTAPNRGG
CCCCCCCCCEEECCCHHHCCCCCHHHHCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCC
FNLASLTQQPVMNSIPGNRWDSRLNGVCLTISGSAMKNTCNAKMIADTGIISSFIDFKSA
CCHHHHHHHHHHHCCCCCCCHHCCCCEEEEEECHHHHCCCCCEEEEHHHHHHHHHHHHHH
SLMGKLKPGRLNPKNTLKLSIPRIFDYSLTPGNRNGLNVWNLHVSPQLDQAMVVNSGIAL
HHHCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEECCCEEE
FDRYNVLFDPVNGREGFRPRS
EECCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]