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The map label for this gene is yjgF [C]

Identifier: 17231361

GI number: 17231361

Start: 4669028

End: 4670158

Strand: Reverse

Name: yjgF [C]

Synonym: all3869

Alternate gene names: 17231361

Gene position: 4670158-4669028 (Counterclockwise)

Preceding gene: 17231362

Following gene: 17231360

Centisome position: 72.81

GC content: 40.14

Gene sequence:

>1131_bases
ATGGATGCTGAGGAAATTTTGGAGAGATACGCTAATGGAGAACGAAATTTTTGTAACGGAAATCGCCAAGGTATAGACCT
TAGTGGTACAGATCTGAGTGAGATAAACCTATCTAAATCCAATTGGAACGGGGCTGATTTAAGTGAGGCAATCCTCACTC
ATGCGACACTTAATAATACAAACCTCAGTAGAGCATCTCTAACCAATGCAAATTTGAGTGGAATAGAGGGTTCTTATCTC
AATCTTAGTTGGGCAGACCTAAATGGTGCATACTTAAGTGGTGCAAAGTTGATTGATGCAAATCTTGTTGGAGCGGATTT
GTGTGGAGCAAACTTGACTTCAATAAAGCTAATTCAAGTAAATTTTCATGGTGCAAATCTTCAGAGAGTTAAACTTCGGG
GAGTCACATTCGAGAGATGTGATTTATCAGAGGTAAACTTAACTGAGGCGGATTTAGTTAGGGTTTTTTTAGGTCAGGCG
AATCTCAGAAACGCCTATTTACAAGGAGCAAATTTAGAAAGAGCTGATCTAGCAAATGCAAATTTAATCAAGGCAAATCT
GGATGGTGCAAATTTAAGGAAGGCAAATTTAAGTGGGGCGAATATATATGGAGCCAGCTTTGAAGATGCAGACCTGACTG
GTGCGATAATGCCTGATGGAGAAGTTTATAAGCCGATCGCTATTGAGGTAGAAATCGGTAAACAAGAAGTATCGTTAGAA
AAAGTGATATCTATGGCTCATCAAGTTATTCGTACAGATAAAGCACCTGCACCAGTGGGGCCTTATAATCAAGCGATCGC
CGCTTCTGGTAAATTACTATTCGTAGCTGGACAAATTGCGATCGATCCCCGATTAGGTGATGTTGTCTATACTGATGATG
TAAAAAAGCAAACTGAACAAGTATTCGCTAATATCCAAGCAATCTTACAAGCTGCTGGGATTAAATTTTCTAATGTGGTC
AAAACAACTGTATTCCTCGCGGATATGAATGATTTTGCTGCGGTGAATGCAGTTTACGCCAAATATTTTGAGGAAGCCAC
AGCGCCGGCTCGTGCTTGTGTAGAGGTATCACGCTTGCCAAAAGATGTTTTGGTGGAAATTGAGTGTATTGCTGTGATTC
CTGAAAGATAA

Upstream 100 bases:

>100_bases
GGAACGGACATCACAAAGGCATGGAAGCATAGACAAGAGCAAAATACCTTTGACAAAAATTACTAGATTATACTTGGTAA
GTGGTATTTAAAGATGCTTT

Downstream 100 bases:

>100_bases
TTCAAAAATCCCCGACTTTTCCCAAAAATCGGGTATTTCAATCTTTGTTCTGATTTGAGGATAAGAATTTTCAACCATAT
CCTTTGAAAAGCGATCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDAEEILERYANGERNFCNGNRQGIDLSGTDLSEINLSKSNWNGADLSEAILTHATLNNTNLSRASLTNANLSGIEGSYL
NLSWADLNGAYLSGAKLIDANLVGADLCGANLTSIKLIQVNFHGANLQRVKLRGVTFERCDLSEVNLTEADLVRVFLGQA
NLRNAYLQGANLERADLANANLIKANLDGANLRKANLSGANIYGASFEDADLTGAIMPDGEVYKPIAIEVEIGKQEVSLE
KVISMAHQVIRTDKAPAPVGPYNQAIAASGKLLFVAGQIAIDPRLGDVVYTDDVKKQTEQVFANIQAILQAAGIKFSNVV
KTTVFLADMNDFAAVNAVYAKYFEEATAPARACVEVSRLPKDVLVEIECIAVIPER

Sequences:

>Translated_376_residues
MDAEEILERYANGERNFCNGNRQGIDLSGTDLSEINLSKSNWNGADLSEAILTHATLNNTNLSRASLTNANLSGIEGSYL
NLSWADLNGAYLSGAKLIDANLVGADLCGANLTSIKLIQVNFHGANLQRVKLRGVTFERCDLSEVNLTEADLVRVFLGQA
NLRNAYLQGANLERADLANANLIKANLDGANLRKANLSGANIYGASFEDADLTGAIMPDGEVYKPIAIEVEIGKQEVSLE
KVISMAHQVIRTDKAPAPVGPYNQAIAASGKLLFVAGQIAIDPRLGDVVYTDDVKKQTEQVFANIQAILQAAGIKFSNVV
KTTVFLADMNDFAAVNAVYAKYFEEATAPARACVEVSRLPKDVLVEIECIAVIPER
>Mature_376_residues
MDAEEILERYANGERNFCNGNRQGIDLSGTDLSEINLSKSNWNGADLSEAILTHATLNNTNLSRASLTNANLSGIEGSYL
NLSWADLNGAYLSGAKLIDANLVGADLCGANLTSIKLIQVNFHGANLQRVKLRGVTFERCDLSEVNLTEADLVRVFLGQA
NLRNAYLQGANLERADLANANLIKANLDGANLRKANLSGANIYGASFEDADLTGAIMPDGEVYKPIAIEVEIGKQEVSLE
KVISMAHQVIRTDKAPAPVGPYNQAIAASGKLLFVAGQIAIDPRLGDVVYTDDVKKQTEQVFANIQAILQAAGIKFSNVV
KTTVFLADMNDFAAVNAVYAKYFEEATAPARACVEVSRLPKDVLVEIECIAVIPER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=129, Percent_Identity=44.9612403100775, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI39753959, Length=177, Percent_Identity=35.5932203389831, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI87082396, Length=127, Percent_Identity=51.1811023622047, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI87082213, Length=127, Percent_Identity=44.8818897637795, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787245, Length=129, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790502, Length=206, Percent_Identity=25.2427184466019, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71982068, Length=152, Percent_Identity=42.7631578947368, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI25148896, Length=139, Percent_Identity=44.6043165467626, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71982075, Length=131, Percent_Identity=44.2748091603053, Blast_Score=113, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6322138, Length=123, Percent_Identity=41.4634146341463, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6320899, Length=100, Percent_Identity=43, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19921376, Length=129, Percent_Identity=41.0852713178295, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI221377802, Length=196, Percent_Identity=34.6938775510204, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 40431; Mature: 40431

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAEEILERYANGERNFCNGNRQGIDLSGTDLSEINLSKSNWNGADLSEAILTHATLNNT
CCHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHEECCCCCCCCCCHHHHHHHHEECCCC
NLSRASLTNANLSGIEGSYLNLSWADLNGAYLSGAKLIDANLVGADLCGANLTSIKLIQV
CCCCEEECCCCCCCCCCCEEEEEEECCCCEEECCCEEEECCCCCHHHCCCCCCEEEEEEE
NFHGANLQRVKLRGVTFERCDLSEVNLTEADLVRVFLGQANLRNAYLQGANLERADLANA
EECCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCHHHCCCC
NLIKANLDGANLRKANLSGANIYGASFEDADLTGAIMPDGEVYKPIAIEVEIGKQEVSLE
EEEEEECCCCCEEECCCCCCEEECCCCCCCCCEEEECCCCCEECCEEEEEEECCHHHHHH
KVISMAHQVIRTDKAPAPVGPYNQAIAASGKLLFVAGQIAIDPRLGDVVYTDDVKKQTEQ
HHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCEEEECHHHHHHHH
VFANIQAILQAAGIKFSNVVKTTVFLADMNDFAAVNAVYAKYFEEATAPARACVEVSRLP
HHHHHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
KDVLVEIECIAVIPER
CCCEEEEEEEEEECCC
>Mature Secondary Structure
MDAEEILERYANGERNFCNGNRQGIDLSGTDLSEINLSKSNWNGADLSEAILTHATLNNT
CCHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHEECCCCCCCCCCHHHHHHHHEECCCC
NLSRASLTNANLSGIEGSYLNLSWADLNGAYLSGAKLIDANLVGADLCGANLTSIKLIQV
CCCCEEECCCCCCCCCCCEEEEEEECCCCEEECCCEEEECCCCCHHHCCCCCCEEEEEEE
NFHGANLQRVKLRGVTFERCDLSEVNLTEADLVRVFLGQANLRNAYLQGANLERADLANA
EECCCCEEEEEEECCEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCHHHCCCC
NLIKANLDGANLRKANLSGANIYGASFEDADLTGAIMPDGEVYKPIAIEVEIGKQEVSLE
EEEEEECCCCCEEECCCCCCEEECCCCCCCCCEEEECCCCCEECCEEEEEEECCHHHHHH
KVISMAHQVIRTDKAPAPVGPYNQAIAASGKLLFVAGQIAIDPRLGDVVYTDDVKKQTEQ
HHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCEEEECHHHHHHHH
VFANIQAILQAAGIKFSNVVKTTVFLADMNDFAAVNAVYAKYFEEATAPARACVEVSRLP
HHHHHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
KDVLVEIECIAVIPER
CCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7787182; 8590279; 8905231 [H]