Click here to switch to the map view.

The map label for this gene is 17231344

Identifier: 17231344

GI number: 17231344

Start: 4648606

End: 4649451

Strand: Reverse

Name: 17231344

Synonym: all3852

Alternate gene names: NA

Gene position: 4649451-4648606 (Counterclockwise)

Preceding gene: 17231345

Following gene: 17231343

Centisome position: 72.49

GC content: 44.21

Gene sequence:

>846_bases
ATGGGCAGAAAATCTAAAATTTTACTTGCAAGTATTGTAACCGTGGCGATCGCCGGATGTGCCTCGGAAGATACACCACC
AATTGCTAATCCTAGTCCCCCCCCAACTGCTGCGCCTGTAGCGAAAGCGCCAGTTAAGGCTGAATCCTTTAATAATCCGG
TGGTGTCTCCTAATGCGTCTGTAAAGGTTGCCTCTGGGACTCCTAATTTAATTCAATTGACCAATGGTACTGAACGGGCA
AATTTAGTTTCTAAAGGACGGATTGACCCCTTTGCTCAAATTATCGGACAGCCAATTGCCGAAATGCCAGCAAATACACC
TGTTAAAACAGTCCCCTCTTTACCACCTCTACCCCCTGGTACTACGCCAAAAAGGGTAAATGTGAAAAACAATGCAAATT
CGACTACAAACAAGAAAACACTGATAGCAAAATCACGCCCCAGTTTAATGCCGGTTTTGCCTAAAGTTTTACCTCAAGTC
GTACCCAATCCGACTTTAGTTTCAGTATTACCACCACCGGCACAACCTGATTTAGCTAAAGCAGTTGTGGTTACTGGTGT
AGTGATAGTGGGTAGAGAACCCCAAGCCATAATTAAAATACCTAACGAAATCGCTAGTCGTTATGTGCAAGCAGGACAAA
GACTAGCAAATGGTCTGTTGGTGAAACGAATTGAAATGAATGCAGGTTCCAATCCGATTGTTATTCTGGAACAATATGGT
ATTGAAGTTGCCAGAATGGTGGGTGAAGCGCCTGTTGGAACTATACCAGGAAGCACAAGCCCTACTGGTAGTCCGGTTTC
AGTTGTAACACCTACTACTAATCTTCCTGCTGTTGGAGCCTCATAA

Upstream 100 bases:

>100_bases
AAAATTAGGTTATAAAGGAAACGACAACAATGCCTGAAATACAAACAGGCATTTTTGCCTTTTATCAATAACAGTTTCCT
ATAGCGTTTGAGAACGGCTA

Downstream 100 bases:

>100_bases
AGATGGAGACTAAAGAGAAAGTCGAATTTGCGGGTTTACCCTTGGCTGTCTATCGAGAGATAGCAGCTCATCTACGTCAA
GTCGAAGGGGTAGAAGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MGRKSKILLASIVTVAIAGCASEDTPPIANPSPPPTAAPVAKAPVKAESFNNPVVSPNASVKVASGTPNLIQLTNGTERA
NLVSKGRIDPFAQIIGQPIAEMPANTPVKTVPSLPPLPPGTTPKRVNVKNNANSTTNKKTLIAKSRPSLMPVLPKVLPQV
VPNPTLVSVLPPPAQPDLAKAVVVTGVVIVGREPQAIIKIPNEIASRYVQAGQRLANGLLVKRIEMNAGSNPIVILEQYG
IEVARMVGEAPVGTIPGSTSPTGSPVSVVTPTTNLPAVGAS

Sequences:

>Translated_281_residues
MGRKSKILLASIVTVAIAGCASEDTPPIANPSPPPTAAPVAKAPVKAESFNNPVVSPNASVKVASGTPNLIQLTNGTERA
NLVSKGRIDPFAQIIGQPIAEMPANTPVKTVPSLPPLPPGTTPKRVNVKNNANSTTNKKTLIAKSRPSLMPVLPKVLPQV
VPNPTLVSVLPPPAQPDLAKAVVVTGVVIVGREPQAIIKIPNEIASRYVQAGQRLANGLLVKRIEMNAGSNPIVILEQYG
IEVARMVGEAPVGTIPGSTSPTGSPVSVVTPTTNLPAVGAS
>Mature_280_residues
GRKSKILLASIVTVAIAGCASEDTPPIANPSPPPTAAPVAKAPVKAESFNNPVVSPNASVKVASGTPNLIQLTNGTERAN
LVSKGRIDPFAQIIGQPIAEMPANTPVKTVPSLPPLPPGTTPKRVNVKNNANSTTNKKTLIAKSRPSLMPVLPKVLPQVV
PNPTLVSVLPPPAQPDLAKAVVVTGVVIVGREPQAIIKIPNEIASRYVQAGQRLANGLLVKRIEMNAGSNPIVILEQYGI
EVARMVGEAPVGTIPGSTSPTGSPVSVVTPTTNLPAVGAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28847; Mature: 28716

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKSKILLASIVTVAIAGCASEDTPPIANPSPPPTAAPVAKAPVKAESFNNPVVSPNAS
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
VKVASGTPNLIQLTNGTERANLVSKGRIDPFAQIIGQPIAEMPANTPVKTVPSLPPLPPG
EEEECCCCCEEEECCCCCHHHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCC
TTPKRVNVKNNANSTTNKKTLIAKSRPSLMPVLPKVLPQVVPNPTLVSVLPPPAQPDLAK
CCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
AVVVTGVVIVGREPQAIIKIPNEIASRYVQAGQRLANGLLVKRIEMNAGSNPIVILEQYG
HHHHHEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHC
IEVARMVGEAPVGTIPGSTSPTGSPVSVVTPTTNLPAVGAS
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
GRKSKILLASIVTVAIAGCASEDTPPIANPSPPPTAAPVAKAPVKAESFNNPVVSPNAS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
VKVASGTPNLIQLTNGTERANLVSKGRIDPFAQIIGQPIAEMPANTPVKTVPSLPPLPPG
EEEECCCCCEEEECCCCCHHHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCC
TTPKRVNVKNNANSTTNKKTLIAKSRPSLMPVLPKVLPQVVPNPTLVSVLPPPAQPDLAK
CCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
AVVVTGVVIVGREPQAIIKIPNEIASRYVQAGQRLANGLLVKRIEMNAGSNPIVILEQYG
HHHHHEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHC
IEVARMVGEAPVGTIPGSTSPTGSPVSVVTPTTNLPAVGAS
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA