Click here to switch to the map view.

The map label for this gene is 17231325

Identifier: 17231325

GI number: 17231325

Start: 4633673

End: 4634284

Strand: Direct

Name: 17231325

Synonym: alr3833

Alternate gene names: NA

Gene position: 4633673-4634284 (Clockwise)

Preceding gene: 17231324

Following gene: 17231326

Centisome position: 72.25

GC content: 40.85

Gene sequence:

>612_bases
ATGCGCTCATTTCGCTCTGAACCAATATTGTGGATTCACGTCGCTGGATTGGCGACACTACCAATTTTTTTGCTATTGTG
CTTATTGTTCCTTTCTGTTGGTGAGCCACTTTTACCAGTCTGGATGGAACTTTTGTTAGTAGCTGCAACTGGTCTTATTC
CACTTTTATGGATGCAGTTGCGTCGCCCTTTTTATATATTTGCCATTTTGGGAATTGCCCTCAAGCCAGAAAATCTGACT
GAGCAGCAAAGAAAAATCCTTTGTTTAATTAATACCAAGTTAAATCGTGTGCTGGCTCTATTGTCAGCAATTTTATCTAT
TTTTGTATTGTGGCAGCTATATCAAGCTGCGCCTTTAGTTGTCAACATTACAAGTCAATTACCCCAGTGGCGTATCTTGG
GGTTAGCACTTGCGGCTTTAACCTTTTTGGCAAGTAATTTGTTTCTGCAAATTCCCGTGAGCGTAGCGCGGGTTTTGGTC
ACAAATGACACAGAATTTGCAGCGATAGAACCATTACCTTTAGAGAAGATTAACCAGGATTTCACAATTTTAGGGGTGCG
GGTTAATAAAATCTTGCCCCAGTTGCCTGTCAAAGTTAAAACTGAGGAATGA

Upstream 100 bases:

>100_bases
GGAAACAAACCTGGGAGAGATTTAAACCTGACTTTCTTGCTGGTATCCAAACTTAAAATTCAACACTCAGCACTCAAAAC
TCAAAACTCAGGACTCTTTT

Downstream 100 bases:

>100_bases
GGGACTATGGCTAAGATTACAGCTACCAGTAATTATCAATTTTCTCGTGATCCTGATATTTGGAGCAATCTCCAATATGC
GATCGCCACTACTTCTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MRSFRSEPILWIHVAGLATLPIFLLLCLLFLSVGEPLLPVWMELLLVAATGLIPLLWMQLRRPFYIFAILGIALKPENLT
EQQRKILCLINTKLNRVLALLSAILSIFVLWQLYQAAPLVVNITSQLPQWRILGLALAALTFLASNLFLQIPVSVARVLV
TNDTEFAAIEPLPLEKINQDFTILGVRVNKILPQLPVKVKTEE

Sequences:

>Translated_203_residues
MRSFRSEPILWIHVAGLATLPIFLLLCLLFLSVGEPLLPVWMELLLVAATGLIPLLWMQLRRPFYIFAILGIALKPENLT
EQQRKILCLINTKLNRVLALLSAILSIFVLWQLYQAAPLVVNITSQLPQWRILGLALAALTFLASNLFLQIPVSVARVLV
TNDTEFAAIEPLPLEKINQDFTILGVRVNKILPQLPVKVKTEE
>Mature_203_residues
MRSFRSEPILWIHVAGLATLPIFLLLCLLFLSVGEPLLPVWMELLLVAATGLIPLLWMQLRRPFYIFAILGIALKPENLT
EQQRKILCLINTKLNRVLALLSAILSIFVLWQLYQAAPLVVNITSQLPQWRILGLALAALTFLASNLFLQIPVSVARVLV
TNDTEFAAIEPLPLEKINQDFTILGVRVNKILPQLPVKVKTEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22836; Mature: 22836

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFRSEPILWIHVAGLATLPIFLLLCLLFLSVGEPLLPVWMELLLVAATGLIPLLWMQL
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRPFYIFAILGIALKPENLTEQQRKILCLINTKLNRVLALLSAILSIFVLWQLYQAAPLV
CCCHHHHHHHHHHCCCCCCCHHHHHEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VNITSQLPQWRILGLALAALTFLASNLFLQIPVSVARVLVTNDTEFAAIEPLPLEKINQD
EEECHHCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHEECCCCEEEECCCCHHHCCCC
FTILGVRVNKILPQLPVKVKTEE
EEEEEEEHHHHHCCCCCEEECCC
>Mature Secondary Structure
MRSFRSEPILWIHVAGLATLPIFLLLCLLFLSVGEPLLPVWMELLLVAATGLIPLLWMQL
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RRPFYIFAILGIALKPENLTEQQRKILCLINTKLNRVLALLSAILSIFVLWQLYQAAPLV
CCCHHHHHHHHHHCCCCCCCHHHHHEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
VNITSQLPQWRILGLALAALTFLASNLFLQIPVSVARVLVTNDTEFAAIEPLPLEKINQD
EEECHHCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHEECCCCEEEECCCCHHHCCCC
FTILGVRVNKILPQLPVKVKTEE
EEEEEEEHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA