| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231313
Identifier: 17231313
GI number: 17231313
Start: 4619947
End: 4620588
Strand: Reverse
Name: 17231313
Synonym: all3821
Alternate gene names: NA
Gene position: 4620588-4619947 (Counterclockwise)
Preceding gene: 17231314
Following gene: 17231312
Centisome position: 72.04
GC content: 41.74
Gene sequence:
>642_bases ATGACCAAACCTGATCCCAATCGAGTTTTGCGGCGCTTACCCTTAGTAGTAGGTGGGTTAGGCGCTATACTTTTGCTAAT TAACCGTTTATTGACACCAGAATTGACAAACTCTCAAGCCCGTGGTGATGTGCTGGGAGTGATTTTGAGTGCTGTGCTAA TTTTAACGGGTTTAATTTGGCAGCAGGTACAGCCGCGATCGCCTGATTCTGTAGAACTCATTGGCGAAGAAGGTTTTGCT TTAGCAGCAGATTTACCAGAAGCCGTGAAAACAGAACTAGCCTGGGCATCTCATTTATTGTTGACTAACACAGTAACGCG ATCGCTGGTGGTTTACTATCAAGGTAAGGTTTTGTTACGTCGCGGTATTCTGGCACCAAAGGCAGAAGTTACACCAGGCG CGATCGTTAAACGAGTTTTGGAAAAACAACAGCCTGTTTATTTAGTAGCTTTATATGTCTACCCAGGACGAATTGAATTT GATTATTTACCAGAAAATACCCAAGGCGTAATTTGTCAACCAATTGGTAATGAAGGGGTATTAATTTTAGGGGCAAATGC TCCTAGAAGTTACACCAAACAAGATGAAAATTGGATAGCAGGAATTGCTGATAAATTAGCTGTAACCCTCAAATCTATAT AA
Upstream 100 bases:
>100_bases TTATTTGTTTCAACGCATAATTGAGCCAGGAGAAGAATAGAGGAACAAGTGTTAACTGTTGACTGTTAACTGTTGACTGT TGACTATGGACTAACGACTA
Downstream 100 bases:
>100_bases AATTTTACAAAAATATCAATCATGCAAATTCTTTATTGGCTACTCATTGCCTTAATGCTGGTAGGTGTTGTTGGTGCAGT AGTTCCTGCTATCCCTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTKPDPNRVLRRLPLVVGGLGAILLLINRLLTPELTNSQARGDVLGVILSAVLILTGLIWQQVQPRSPDSVELIGEEGFA LAADLPEAVKTELAWASHLLLTNTVTRSLVVYYQGKVLLRRGILAPKAEVTPGAIVKRVLEKQQPVYLVALYVYPGRIEF DYLPENTQGVICQPIGNEGVLILGANAPRSYTKQDENWIAGIADKLAVTLKSI
Sequences:
>Translated_213_residues MTKPDPNRVLRRLPLVVGGLGAILLLINRLLTPELTNSQARGDVLGVILSAVLILTGLIWQQVQPRSPDSVELIGEEGFA LAADLPEAVKTELAWASHLLLTNTVTRSLVVYYQGKVLLRRGILAPKAEVTPGAIVKRVLEKQQPVYLVALYVYPGRIEF DYLPENTQGVICQPIGNEGVLILGANAPRSYTKQDENWIAGIADKLAVTLKSI >Mature_212_residues TKPDPNRVLRRLPLVVGGLGAILLLINRLLTPELTNSQARGDVLGVILSAVLILTGLIWQQVQPRSPDSVELIGEEGFAL AADLPEAVKTELAWASHLLLTNTVTRSLVVYYQGKVLLRRGILAPKAEVTPGAIVKRVLEKQQPVYLVALYVYPGRIEFD YLPENTQGVICQPIGNEGVLILGANAPRSYTKQDENWIAGIADKLAVTLKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23207; Mature: 23075
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPDPNRVLRRLPLVVGGLGAILLLINRLLTPELTNSQARGDVLGVILSAVLILTGLIW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QQVQPRSPDSVELIGEEGFALAADLPEAVKTELAWASHLLLTNTVTRSLVVYYQGKVLLR HHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHH RGILAPKAEVTPGAIVKRVLEKQQPVYLVALYVYPGRIEFDYLPENTQGVICQPIGNEGV HCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCEEEEEECCCCCCCEEEEECCCCCE LILGANAPRSYTKQDENWIAGIADKLAVTLKSI EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKPDPNRVLRRLPLVVGGLGAILLLINRLLTPELTNSQARGDVLGVILSAVLILTGLIW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QQVQPRSPDSVELIGEEGFALAADLPEAVKTELAWASHLLLTNTVTRSLVVYYQGKVLLR HHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHH RGILAPKAEVTPGAIVKRVLEKQQPVYLVALYVYPGRIEFDYLPENTQGVICQPIGNEGV HCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCEEEEEECCCCCCCEEEEECCCCCE LILGANAPRSYTKQDENWIAGIADKLAVTLKSI EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA