| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231295
Identifier: 17231295
GI number: 17231295
Start: 4595360
End: 4595755
Strand: Direct
Name: 17231295
Synonym: alr3803
Alternate gene names: NA
Gene position: 4595360-4595755 (Clockwise)
Preceding gene: 17231293
Following gene: 17231296
Centisome position: 71.65
GC content: 33.84
Gene sequence:
>396_bases GTGGTTATGTCCAGTTCAGTTACGCTACAGAACATTGATAATGTACTCACTTTTTTAACATTATTTTCCAGTCAAAATTG CCAACTATATGACATACAAACTGAACCTTTAACCTTAGACCCTTACTACTATTCTAAGGAATTTAATAGATTCATAACAG CACTTTACGCAGGAAATTTTGTCATATCTTTTGATTGGACAAATTGGCAGGATGAGGCTAATCGTTTTGTAACTAATCCG GAACTATTAAATTTAGCTGATATTTCTACAATACAGAAATTATTGACTAGCCACGTTCGTAAAGAACGTTTTTGTAGTGG TCATCTAGCGCAAATGATAGATAATGGTCATTTGTTGACAATATTGCAGCGACTACAAGCAATTCGCATAAGCTAA
Upstream 100 bases:
>100_bases AATGTTGCGCGAATGATTTAGCGTTGTAATGTGTATAAAAATATATCTAGTAAATCTCTCTAATTGCTTTCTAGCACGCA ATTTATACAGTCTTTAGGTT
Downstream 100 bases:
>100_bases TGCACGTCTAAATTGCATAACTACGAATAAGGGCTGTTGACTGTCAACGGTCAACAGTCATCACTATGGATTGTGCAAGT TAAAAAAAATTCGTAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MVMSSSVTLQNIDNVLTFLTLFSSQNCQLYDIQTEPLTLDPYYYSKEFNRFITALYAGNFVISFDWTNWQDEANRFVTNP ELLNLADISTIQKLLTSHVRKERFCSGHLAQMIDNGHLLTILQRLQAIRIS
Sequences:
>Translated_131_residues MVMSSSVTLQNIDNVLTFLTLFSSQNCQLYDIQTEPLTLDPYYYSKEFNRFITALYAGNFVISFDWTNWQDEANRFVTNP ELLNLADISTIQKLLTSHVRKERFCSGHLAQMIDNGHLLTILQRLQAIRIS >Mature_131_residues MVMSSSVTLQNIDNVLTFLTLFSSQNCQLYDIQTEPLTLDPYYYSKEFNRFITALYAGNFVISFDWTNWQDEANRFVTNP ELLNLADISTIQKLLTSHVRKERFCSGHLAQMIDNGHLLTILQRLQAIRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15185; Mature: 15185
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMSSSVTLQNIDNVLTFLTLFSSQNCQLYDIQTEPLTLDPYYYSKEFNRFITALYAGNF CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCE VISFDWTNWQDEANRFVTNPELLNLADISTIQKLLTSHVRKERFCSGHLAQMIDNGHLLT EEEECCCCCHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHH ILQRLQAIRIS HHHHHHHHCCC >Mature Secondary Structure MVMSSSVTLQNIDNVLTFLTLFSSQNCQLYDIQTEPLTLDPYYYSKEFNRFITALYAGNF CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCE VISFDWTNWQDEANRFVTNPELLNLADISTIQKLLTSHVRKERFCSGHLAQMIDNGHLLT EEEECCCCCHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHH ILQRLQAIRIS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA