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The map label for this gene is yciH [C]

Identifier: 17231287

GI number: 17231287

Start: 4586706

End: 4587053

Strand: Direct

Name: yciH [C]

Synonym: alr3795

Alternate gene names: 17231287

Gene position: 4586706-4587053 (Clockwise)

Preceding gene: 17231282

Following gene: 17231288

Centisome position: 71.51

GC content: 39.94

Gene sequence:

>348_bases
ATGTCTTCTTCCAATTCCAAATCTTCTGACAAGCGCTTTATTTATCGTGAATTTGGCAACGACAACTCTGCCGCCTTAGA
AAGACCAACTACCGAATTACCACCACAACAACAAAATGTCAGAGTACAGGCTACCCGCGCCGGCCGCAAAGGAAAAACTG
TCACGGTGATTACTGGGTTTCAAACTAAACCAGAAGTATTGGCAGATTTAGTAAAACAGTTGAAAACTCAATGTGGTACA
GGTGGGACAGTTAAAGATAACGAAATTGAAATTCAAGGCGAACATAAACAGAAAATTTTAGAGATTTTGATTAAGCTAGG
CTACAAAGCCAAAATTAGTGGCGGTTAA

Upstream 100 bases:

>100_bases
GTTCGTAATTTATAATTTCTAATCTGTAATAAATATATGGTGCAAGACCTCAAAACAACTGACCACTGACAAATCTAATT
TCTCGTATTCAGTAAATTTT

Downstream 100 bases:

>100_bases
CTGGCTAGTTTTTATGCTTTGTAGTAAACACTCTAGTTTTGACAAAACCCAGAACTAAAAGGCTTACTCCTGTACTTTGG
TATTCAGATTTAAGGTTTAA

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSSSNSKSSDKRFIYREFGNDNSAALERPTTELPPQQQNVRVQATRAGRKGKTVTVITGFQTKPEVLADLVKQLKTQCGT
GGTVKDNEIEIQGEHKQKILEILIKLGYKAKISGG

Sequences:

>Translated_115_residues
MSSSNSKSSDKRFIYREFGNDNSAALERPTTELPPQQQNVRVQATRAGRKGKTVTVITGFQTKPEVLADLVKQLKTQCGT
GGTVKDNEIEIQGEHKQKILEILIKLGYKAKISGG
>Mature_114_residues
SSSNSKSSDKRFIYREFGNDNSAALERPTTELPPQQQNVRVQATRAGRKGKTVTVITGFQTKPEVLADLVKQLKTQCGTG
GTVKDNEIEIQGEHKQKILEILIKLGYKAKISGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=118, Percent_Identity=39.8305084745763, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12633; Mature: 12501

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSNSKSSDKRFIYREFGNDNSAALERPTTELPPQQQNVRVQATRAGRKGKTVTVITGF
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECC
QTKPEVLADLVKQLKTQCGTGGTVKDNEIEIQGEHKQKILEILIKLGYKAKISGG
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCEEEECCC
>Mature Secondary Structure 
SSSNSKSSDKRFIYREFGNDNSAALERPTTELPPQQQNVRVQATRAGRKGKTVTVITGF
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECC
QTKPEVLADLVKQLKTQCGTGGTVKDNEIEIQGEHKQKILEILIKLGYKAKISGG
CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]