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The map label for this gene is 17231272

Identifier: 17231272

GI number: 17231272

Start: 4566393

End: 4567892

Strand: Reverse

Name: 17231272

Synonym: all3780

Alternate gene names: NA

Gene position: 4567892-4566393 (Counterclockwise)

Preceding gene: 17231273

Following gene: 17231271

Centisome position: 71.22

GC content: 46.8

Gene sequence:

>1500_bases
ATGACAGCACAAAGGGGAGTGCAAGCCGCCTTTGTGTTGAGTTGGCAGGAATTAGCAGAGGATGATAGGTTATTAGGCTG
TGTACTTAGTTTATTTGCAGCCGCACCCATACCCTGGAACTTAGTAGAACAGTGCTTACCAGAGAAAGATGAGGATGAGT
TAGAGGAAATTCGGGATGATAAATTATTGAATCTGCATTTACTCCAGCGCAAAGGTGAAGGAATCTATCAACTACATCCC
CTACTGCGGGAATTTTTCCAATCTAAGTTTACAGGTTTAGAGCAAGCGGAGGAATTTAGGCGATCATTTTGCGGTGTAAT
AGTAGCAGTTGCTAAACAAATTCCTCAGACTCCTACCCTTGAAAAAATTAACGCTGTTTCCCTTGCCATACCACACATAG
CTGAAGTAGCAAACAATCTCATTCAATACGTCAGTGATGAAAATTTCATTTTGCCTTTCGTCGGCTTGGGTAGCTTCTAT
CAAGGACAAGGGCTATATAGCCAAGCCGAACCTTGGAAAACACAGTGTTTATCAACAGTACAAAACCGTTTGGGAGACAA
TCATCCCGATGTCGCCACCAGCCTCAACAACTTGGCTGAACTCTACTATTTCCAAGGCAAGTACGACCAAGCCGAACCCC
TGTATCTCCAAGCTTTAGAACTCCATAAACGCCTGCTGGGAGACAATCATCCCGATGTCGCCACCAGCCTCAACAACTTG
GCATATCTCTACGATTCCCAAGGAAAGTACGACCAAGCCGAACCTCTGTTTCTCCAAGCTTTAGAACTCCATAAACGCCT
GCTGGGAGACAATCATCCCGATGTCGCCACCAGCCTCAACAACTTGGCTGAACTCTACGATTCCCAAGGAAAGTACGACC
AAGCCGAACCCCTGTATCTCCAAGCTTTAGAACTCAGACAACGCCTGCTGGGAGACAATCATCCCGATGTCGCCACCAGC
CTCAACAACTTGGCATATCTCTACCGCACCCAAGGAAAGTACGACCAAGCCGAACCCCTGTATCTCCAAGCTTTAGAACT
CAGACAACACCTGCTGGGAGACAATCATCCCAATGTCGCCACCAGCCTCAACAACTTGGCAAGACTCTACGATTCCCAAG
GAAAGTACGACCAAGCCGAACCCCTGTATCTCCAAGCTTTAGAACTCAGACAACGCCTGCTGGGAGACAATCATCCCGAT
GTCGCAGCCAGCCTCAACAACTTGGCATATCTCTACTATTCCCAAGGAATTTACGAGCGAGCCGAACCCCTGTATCTCCA
AGCTTTAGAACTTAAACAACGCCTGCTAGGAGACAATCATCCCTCAGTCGCTATCAGCCTCAACAACTTGGCTAAGCTCT
ATGATTCCCAAGGAAAGTACGACCAAGCCGAACCTCTCTATCTTCAAGCTTTGACTATTTTCGAGGGAAGTTTAGGAGGG
AATCATCCTAATACTGTGAGAGTGCGTGAGAATTTAGCAAATTTACGCGATTCTCTCTAA

Upstream 100 bases:

>100_bases
ATATTTGGCGCGAAAACCAGATTTATCCTTATCAGCAATGATGCAGCGTTTGGAGAAAAAGCGATTAGAACAACCTGCAC
TTGTCAAGCCAGATGCTGAT

Downstream 100 bases:

>100_bases
CGAGAACACGAAAATTTACCTTCCCAACCGCATCAATCAAGCTTTTATCTCCAAGTTTCCTGTTTTGAACTCAAAGTTTC
ATGTTCAGAACCCGAACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; Kinesin Light Chain; NB-ARC Domain-Containing Protein; NB-ARC Domain Protein; Tetratricopeptide Domain-Containing Protein; Serine/Threonine Protein Kinase; Tetratricopeptide Repeat Domain Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Serine/Threonine Kinase Family Protein; Nb-Arc; TPR Domain-Containing Protein; Tetratricopeptide Protein; SLEI Family; Sigma-70 Region 2 Domain Protein; SEFIR Domain Protein; TPR Domain Family Protein; SEC-C Motif Domain Protein; Tetratricopeptide TPR2 Protein; Ankyrin Repeat Domain Protein; Tetratricopeptide Tpr_3 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Signal Transduction Protein; Protein Kinase; Sel1 Domain-Containing Protein; Peptidase-Like

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MTAQRGVQAAFVLSWQELAEDDRLLGCVLSLFAAAPIPWNLVEQCLPEKDEDELEEIRDDKLLNLHLLQRKGEGIYQLHP
LLREFFQSKFTGLEQAEEFRRSFCGVIVAVAKQIPQTPTLEKINAVSLAIPHIAEVANNLIQYVSDENFILPFVGLGSFY
QGQGLYSQAEPWKTQCLSTVQNRLGDNHPDVATSLNNLAELYYFQGKYDQAEPLYLQALELHKRLLGDNHPDVATSLNNL
AYLYDSQGKYDQAEPLFLQALELHKRLLGDNHPDVATSLNNLAELYDSQGKYDQAEPLYLQALELRQRLLGDNHPDVATS
LNNLAYLYRTQGKYDQAEPLYLQALELRQHLLGDNHPNVATSLNNLARLYDSQGKYDQAEPLYLQALELRQRLLGDNHPD
VAASLNNLAYLYYSQGIYERAEPLYLQALELKQRLLGDNHPSVAISLNNLAKLYDSQGKYDQAEPLYLQALTIFEGSLGG
NHPNTVRVRENLANLRDSL

Sequences:

>Translated_499_residues
MTAQRGVQAAFVLSWQELAEDDRLLGCVLSLFAAAPIPWNLVEQCLPEKDEDELEEIRDDKLLNLHLLQRKGEGIYQLHP
LLREFFQSKFTGLEQAEEFRRSFCGVIVAVAKQIPQTPTLEKINAVSLAIPHIAEVANNLIQYVSDENFILPFVGLGSFY
QGQGLYSQAEPWKTQCLSTVQNRLGDNHPDVATSLNNLAELYYFQGKYDQAEPLYLQALELHKRLLGDNHPDVATSLNNL
AYLYDSQGKYDQAEPLFLQALELHKRLLGDNHPDVATSLNNLAELYDSQGKYDQAEPLYLQALELRQRLLGDNHPDVATS
LNNLAYLYRTQGKYDQAEPLYLQALELRQHLLGDNHPNVATSLNNLARLYDSQGKYDQAEPLYLQALELRQRLLGDNHPD
VAASLNNLAYLYYSQGIYERAEPLYLQALELKQRLLGDNHPSVAISLNNLAKLYDSQGKYDQAEPLYLQALTIFEGSLGG
NHPNTVRVRENLANLRDSL
>Mature_498_residues
TAQRGVQAAFVLSWQELAEDDRLLGCVLSLFAAAPIPWNLVEQCLPEKDEDELEEIRDDKLLNLHLLQRKGEGIYQLHPL
LREFFQSKFTGLEQAEEFRRSFCGVIVAVAKQIPQTPTLEKINAVSLAIPHIAEVANNLIQYVSDENFILPFVGLGSFYQ
GQGLYSQAEPWKTQCLSTVQNRLGDNHPDVATSLNNLAELYYFQGKYDQAEPLYLQALELHKRLLGDNHPDVATSLNNLA
YLYDSQGKYDQAEPLFLQALELHKRLLGDNHPDVATSLNNLAELYDSQGKYDQAEPLYLQALELRQRLLGDNHPDVATSL
NNLAYLYRTQGKYDQAEPLYLQALELRQHLLGDNHPNVATSLNNLARLYDSQGKYDQAEPLYLQALELRQRLLGDNHPDV
AASLNNLAYLYYSQGIYERAEPLYLQALELKQRLLGDNHPSVAISLNNLAKLYDSQGKYDQAEPLYLQALTIFEGSLGGN
HPNTVRVRENLANLRDSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI34304360, Length=356, Percent_Identity=39.0449438202247, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI41871960, Length=292, Percent_Identity=42.4657534246575, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI41871955, Length=292, Percent_Identity=42.4657534246575, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI41871946, Length=292, Percent_Identity=42.4657534246575, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI194306559, Length=200, Percent_Identity=52, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI33620730, Length=200, Percent_Identity=52, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI110735431, Length=200, Percent_Identity=52, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI198041734, Length=200, Percent_Identity=50.5, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI198041731, Length=200, Percent_Identity=50.5, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI12383062, Length=200, Percent_Identity=50.5, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI198041728, Length=195, Percent_Identity=51.2820512820513, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI91825557, Length=238, Percent_Identity=45.3781512605042, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI18104962, Length=316, Percent_Identity=25.6329113924051, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI32307148, Length=286, Percent_Identity=29.3706293706294, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI32307150, Length=286, Percent_Identity=29.3706293706294, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI19923891, Length=88, Percent_Identity=47.7272727272727, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71984524, Length=299, Percent_Identity=40.8026755852843, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71984535, Length=297, Percent_Identity=41.4141414141414, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71984517, Length=278, Percent_Identity=42.0863309352518, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71984527, Length=278, Percent_Identity=42.0863309352518, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17541458, Length=331, Percent_Identity=33.5347432024169, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI115532692, Length=285, Percent_Identity=30.1754385964912, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI115532690, Length=286, Percent_Identity=30.0699300699301, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17647555, Length=286, Percent_Identity=42.3076923076923, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI17647755, Length=286, Percent_Identity=30.4195804195804, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24585827, Length=286, Percent_Identity=30.4195804195804, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24585829, Length=286, Percent_Identity=30.4195804195804, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI18857963, Length=298, Percent_Identity=25.1677852348993, Blast_Score=79, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56476; Mature: 56345

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure 
TAQRGVQAAFVLSWQELAEDDRLLGCVLSLFAAAPIPWNLVEQCLPEKDEDELEEIRDD
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCC
KLLNLHLLQRKGEGIYQLHPLLREFFQSKFTGLEQAEEFRRSFCGVIVAVAKQIPQTPTL
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
EKINAVSLAIPHIAEVANNLIQYVSDENFILPFVGLGSFYQGQGLYSQAEPWKTQCLSTV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
QNRLGDNHPDVATSLNNLAELYYFQGKYDQAEPLYLQALELHKRLLGDNHPDVATSLNNL
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHE
AYLYDSQGKYDQAEPLFLQALELHKRLLGDNHPDVATSLNNLAELYDSQGKYDQAEPLYL
EEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH
QALELRQRLLGDNHPDVATSLNNLAYLYRTQGKYDQAEPLYLQALELRQHLLGDNHPNVA
HHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH
TSLNNLARLYDSQGKYDQAEPLYLQALELRQRLLGDNHPDVAASLNNLAYLYYSQGIYER
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCHHHH
AEPLYLQALELKQRLLGDNHPSVAISLNNLAKLYDSQGKYDQAEPLYLQALTIFEGSLGG
CCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC
NHPNTVRVRENLANLRDSL
CCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA