| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231269
Identifier: 17231269
GI number: 17231269
Start: 4565135
End: 4565377
Strand: Reverse
Name: 17231269
Synonym: asl3777
Alternate gene names: NA
Gene position: 4565377-4565135 (Counterclockwise)
Preceding gene: 17231270
Following gene: 17231268
Centisome position: 71.18
GC content: 40.33
Gene sequence:
>243_bases ATGGCAACACTTCAACTTAATATTGAGCAAGTTATATCATTGGTAAAGCAATTAGCAGTTCCAGAACAGCGTATGATATT ACAAGCCATCAAAGCAGAACAAGATGCTTGGTGGCAAAGTAGACTTGATGACGGAGAATTACAGATGCGCTCTTTGAGTT CGTCACGCGGGCTTAATTGGGATATTATGACCGAACAAGAGCGAGAAGACTTTATAGATGATTTGACGCACGAATCAGAA TGA
Upstream 100 bases:
>100_bases GACGGCGATCGCTCTGTTAAAGGTGGCGATCGCCTTGATATGATGATCTCATGAGAATGTGCTATGTCTCATTATTATTG AAGCTTGAGGTACTAAAAAC
Downstream 100 bases:
>100_bases TATCTTATATAGTTGTTTTTGATACAAATACGCTCTTTTCAGGTTAGGCTGGCGAGGTAGTCCTTATAGTTGTTTAGAAC TTGCAAGAAACGGACAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MATLQLNIEQVISLVKQLAVPEQRMILQAIKAEQDAWWQSRLDDGELQMRSLSSSRGLNWDIMTEQEREDFIDDLTHESE
Sequences:
>Translated_80_residues MATLQLNIEQVISLVKQLAVPEQRMILQAIKAEQDAWWQSRLDDGELQMRSLSSSRGLNWDIMTEQEREDFIDDLTHESE >Mature_79_residues ATLQLNIEQVISLVKQLAVPEQRMILQAIKAEQDAWWQSRLDDGELQMRSLSSSRGLNWDIMTEQEREDFIDDLTHESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9360; Mature: 9228
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLQLNIEQVISLVKQLAVPEQRMILQAIKAEQDAWWQSRLDDGELQMRSLSSSRGLNW CCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC DIMTEQEREDFIDDLTHESE CCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure ATLQLNIEQVISLVKQLAVPEQRMILQAIKAEQDAWWQSRLDDGELQMRSLSSSRGLNW CEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC DIMTEQEREDFIDDLTHESE CCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA