| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is pknE [H]
Identifier: 17231224
GI number: 17231224
Start: 4506734
End: 4508437
Strand: Direct
Name: pknE [H]
Synonym: alr3732
Alternate gene names: 17231224
Gene position: 4506734-4508437 (Clockwise)
Preceding gene: 17231223
Following gene: 17231229
Centisome position: 70.27
GC content: 38.67
Gene sequence:
>1704_bases ATGATCGGTAAAGTACTGCAAGCACGCTACCAAATTGTTCAAAACCTGGGTTCAGGGGTATTTGGACAAACATATATTGC TGTAGATATCAATTACCCACATCAACCTAAATGTGTTGTTAAACAACTTAAGGTTAACAGTTTCCACTCTAGTCACCTAG ATACAATCAGATTACGTTTTCTGACAGAAACTGAAACCCTCAAGCACTTGGGACAACACCCCCAGATTCCCAATTTCATT GCTTGTTTTGAAGAAAATGAGCGTTTCTACTTAGTACAAGAGTATATCGGCGGACACGCTTTAACGGCAGAATTGCCAAT TGCTCAAAATTGGGGTTCTGTGTGGCGCGAAGATGAAGTTATTACATTTCTAGAAGATGCGTTAAGTATTTTACAGTTTG TGCATTCGCAAGGTGTGATTCATTGCGATGTTAAACCAGAAAATTTAATCAGACGTGCTGTTAATGGCAAATTAGTTTTA ATTGACTTTGGTTCTATCCAGTCAGTGAATTTTGGCATAGATGAACAAGTATCTATCTATCAGGTTCCGGCTACTTCCTT GGGATACATACCACCAGAGCAATTTATTGGTAAAACTCAAATCAACAGTGATATCTATGCTTTAGGCATGATTGCTATCC AGGCTTTAACTGGGCTAGAACCACTGCAATTAAAAATAGATCCTGATAGTAATGAAATCATTTGGCGTTTTGCTGATACG CCTGTGAGTGACTATCTAGCGGCGATTCTCAGCCAAATGATTCGCTACAATTTCCAAGAACGCTTTCAGTCTGCGGCTGA GGTGTTGCGTGTACTCCAACAGATGAAATGGGAAACATCCTTGCCACAACTTTTGCAAACACAACAGATAGAATATAGGC AGGAACCTAATTCTGAAGCGTCGCCGCTAATCACAGGAATGAAAGTAGGACTAGCGGTTAATACCTTATTAATGGGACTG GGAACTTATTCATTGCTGAGTAATTCTCCAGCTAACACAGAAACAGAACTTTTATATAAAGCGACACAAGAATATCAAGA CGGCGACTTACAACAAGCGATCGCTCTAGCTAAACTCATACCTTCTCATAGTAATGTATATCCAGATGCTCAAGCCACTA TAGACGAATGGCAACAGCAATGGCAAACAGCAGCAAAACAATATTCCTTAGCTGAACAAGCATTACTTGAGAATAGATGG TCAGATGTTTTTGTTGCTGCAAGCGAAGTTCCTAATATTTCATATTGGCAATCTAAAGTTAAGGATGTAGTACAGAAAGC CAATGTCAATATCGAAGCCCAAACACAAGATTTATTAGCCAAAGCTTATGATAAAGCTAGAGCTAAAGATTTTTCTTCAG CATTAGAATATTTGCGTCAAATTCCTCAAGAAAGTTCTGCTGGTGCTTTAGTACAAAAAAAACTAGCTGAATACAACCAG AAAAAACAAATTAGAGCCGCTTATTTTTTACACCAAGCTCGTAAACAAGCATTAGCTGGTAACTTTGATCATGCGGTCAA CTACCTCCGCAAAATTCCTCAAGGTACTCCTGTTTATGCCCAAGCTCAAGCTAAACTCAATGAGTATACACAAAAGTTAC GCCCACAAATCCAAAAGGCTAAGTCTTTGATTGCTCATAATTCAGTTATTCAGGTTGGCAATTTACAATCTGAAATTCAA TTACCAGAAGTAAATATTCGCTAG
Upstream 100 bases:
>100_bases TAAAGTCGAGCTTAGAGTAATTTGTCTTTCCGGAAACAGCACGCAATCAAGAGAATACTTATATAAGGACTAACTCAGTA ACCAGCTCATGAACCACCAC
Downstream 100 bases:
>100_bases TCAAGTCGCTTTGCTCCAATTCAAAACAGGTCAATTTATAGAGACGCGAACCATCACGCCTCTTGACTAAACTGAATAAA CTTCTACTTACTCAAAATCC
Product: protein serine-threonine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MIGKVLQARYQIVQNLGSGVFGQTYIAVDINYPHQPKCVVKQLKVNSFHSSHLDTIRLRFLTETETLKHLGQHPQIPNFI ACFEENERFYLVQEYIGGHALTAELPIAQNWGSVWREDEVITFLEDALSILQFVHSQGVIHCDVKPENLIRRAVNGKLVL IDFGSIQSVNFGIDEQVSIYQVPATSLGYIPPEQFIGKTQINSDIYALGMIAIQALTGLEPLQLKIDPDSNEIIWRFADT PVSDYLAAILSQMIRYNFQERFQSAAEVLRVLQQMKWETSLPQLLQTQQIEYRQEPNSEASPLITGMKVGLAVNTLLMGL GTYSLLSNSPANTETELLYKATQEYQDGDLQQAIALAKLIPSHSNVYPDAQATIDEWQQQWQTAAKQYSLAEQALLENRW SDVFVAASEVPNISYWQSKVKDVVQKANVNIEAQTQDLLAKAYDKARAKDFSSALEYLRQIPQESSAGALVQKKLAEYNQ KKQIRAAYFLHQARKQALAGNFDHAVNYLRKIPQGTPVYAQAQAKLNEYTQKLRPQIQKAKSLIAHNSVIQVGNLQSEIQ LPEVNIR
Sequences:
>Translated_567_residues MIGKVLQARYQIVQNLGSGVFGQTYIAVDINYPHQPKCVVKQLKVNSFHSSHLDTIRLRFLTETETLKHLGQHPQIPNFI ACFEENERFYLVQEYIGGHALTAELPIAQNWGSVWREDEVITFLEDALSILQFVHSQGVIHCDVKPENLIRRAVNGKLVL IDFGSIQSVNFGIDEQVSIYQVPATSLGYIPPEQFIGKTQINSDIYALGMIAIQALTGLEPLQLKIDPDSNEIIWRFADT PVSDYLAAILSQMIRYNFQERFQSAAEVLRVLQQMKWETSLPQLLQTQQIEYRQEPNSEASPLITGMKVGLAVNTLLMGL GTYSLLSNSPANTETELLYKATQEYQDGDLQQAIALAKLIPSHSNVYPDAQATIDEWQQQWQTAAKQYSLAEQALLENRW SDVFVAASEVPNISYWQSKVKDVVQKANVNIEAQTQDLLAKAYDKARAKDFSSALEYLRQIPQESSAGALVQKKLAEYNQ KKQIRAAYFLHQARKQALAGNFDHAVNYLRKIPQGTPVYAQAQAKLNEYTQKLRPQIQKAKSLIAHNSVIQVGNLQSEIQ LPEVNIR >Mature_567_residues MIGKVLQARYQIVQNLGSGVFGQTYIAVDINYPHQPKCVVKQLKVNSFHSSHLDTIRLRFLTETETLKHLGQHPQIPNFI ACFEENERFYLVQEYIGGHALTAELPIAQNWGSVWREDEVITFLEDALSILQFVHSQGVIHCDVKPENLIRRAVNGKLVL IDFGSIQSVNFGIDEQVSIYQVPATSLGYIPPEQFIGKTQINSDIYALGMIAIQALTGLEPLQLKIDPDSNEIIWRFADT PVSDYLAAILSQMIRYNFQERFQSAAEVLRVLQQMKWETSLPQLLQTQQIEYRQEPNSEASPLITGMKVGLAVNTLLMGL GTYSLLSNSPANTETELLYKATQEYQDGDLQQAIALAKLIPSHSNVYPDAQATIDEWQQQWQTAAKQYSLAEQALLENRW SDVFVAASEVPNISYWQSKVKDVVQKANVNIEAQTQDLLAKAYDKARAKDFSSALEYLRQIPQESSAGALVQKKLAEYNQ KKQIRAAYFLHQARKQALAGNFDHAVNYLRKIPQGTPVYAQAQAKLNEYTQKLRPQIQKAKSLIAHNSVIQVGNLQSEIQ LPEVNIR
Specific function: Probably required for both normal cellular growth and differentiation. Inactivation of pknA leads to colonies that appear light green and rough in the absence of combined nitrogen [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI38327572, Length=278, Percent_Identity=26.6187050359712, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI38327570, Length=278, Percent_Identity=26.6187050359712, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI38327568, Length=278, Percent_Identity=26.6187050359712, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI38327566, Length=278, Percent_Identity=26.6187050359712, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI38327564, Length=278, Percent_Identity=26.6187050359712, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI38327562, Length=278, Percent_Identity=26.6187050359712, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI62865639, Length=261, Percent_Identity=27.2030651340996, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI62865641, Length=261, Percent_Identity=27.2030651340996, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI62865643, Length=261, Percent_Identity=27.2030651340996, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI27901803, Length=221, Percent_Identity=28.0542986425339, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI10835242, Length=285, Percent_Identity=24.9122807017544, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI7661974, Length=215, Percent_Identity=29.7674418604651, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI148612818, Length=285, Percent_Identity=24.9122807017544, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI116008188, Length=269, Percent_Identity=23.0483271375465, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI116008192, Length=269, Percent_Identity=23.0483271375465, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI4759050, Length=291, Percent_Identity=25.085910652921, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI83627721, Length=288, Percent_Identity=22.5694444444444, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI19923570, Length=225, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI83776600, Length=263, Percent_Identity=25.4752851711027, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI55743136, Length=225, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI32528295, Length=259, Percent_Identity=25.4826254826255, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI41872673, Length=269, Percent_Identity=26.3940520446097, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI32528297, Length=237, Percent_Identity=26.5822784810127, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI225637562, Length=209, Percent_Identity=25.8373205741627, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI41281753, Length=278, Percent_Identity=25.8992805755396, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI225637560, Length=274, Percent_Identity=26.2773722627737, Blast_Score=67, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17543412, Length=258, Percent_Identity=24.031007751938, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17505246, Length=231, Percent_Identity=24.6753246753247, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI133900707, Length=294, Percent_Identity=25.1700680272109, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI133900709, Length=294, Percent_Identity=25.1700680272109, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71982783, Length=227, Percent_Identity=26.8722466960352, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71982774, Length=227, Percent_Identity=26.8722466960352, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71982766, Length=227, Percent_Identity=26.8722466960352, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71989900, Length=269, Percent_Identity=24.5353159851301, Blast_Score=69, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71988264, Length=212, Percent_Identity=25.9433962264151, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71989905, Length=269, Percent_Identity=24.5353159851301, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71989893, Length=269, Percent_Identity=24.5353159851301, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193203107, Length=269, Percent_Identity=24.5353159851301, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71989911, Length=269, Percent_Identity=24.5353159851301, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI72001122, Length=231, Percent_Identity=23.8095238095238, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319917, Length=237, Percent_Identity=27.4261603375527, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6321126, Length=227, Percent_Identity=30.8370044052863, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324557, Length=224, Percent_Identity=26.7857142857143, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319502, Length=159, Percent_Identity=32.7044025157233, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320674, Length=229, Percent_Identity=28.3842794759825, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24653966, Length=250, Percent_Identity=28, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24653974, Length=257, Percent_Identity=28.4046692607004, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI24653972, Length=257, Percent_Identity=28.4046692607004, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI24653970, Length=257, Percent_Identity=28.7937743190661, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24653968, Length=257, Percent_Identity=28.4046692607004, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI17136516, Length=260, Percent_Identity=27.3076923076923, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24647440, Length=218, Percent_Identity=25.2293577981651, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647442, Length=218, Percent_Identity=25.2293577981651, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646075, Length=185, Percent_Identity=29.1891891891892, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24646073, Length=185, Percent_Identity=29.1891891891892, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 64015; Mature: 64015
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKVLQARYQIVQNLGSGVFGQTYIAVDINYPHQPKCVVKQLKVNSFHSSHLDTIRLRF CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEE LTETETLKHLGQHPQIPNFIACFEENERFYLVQEYIGGHALTAELPIAQNWGSVWREDEV EHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHHHCCEEEEECCCCHHCHHHHHCCCHH ITFLEDALSILQFVHSQGVIHCDVKPENLIRRAVNGKLVLIDFGSIQSVNFGIDEQVSIY HHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCEEE QVPATSLGYIPPEQFIGKTQINSDIYALGMIAIQALTGLEPLQLKIDPDSNEIIWRFADT ECCCCCCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCC PVSDYLAAILSQMIRYNFQERFQSAAEVLRVLQQMKWETSLPQLLQTQQIEYRQEPNSEA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC SPLITGMKVGLAVNTLLMGLGTYSLLSNSPANTETELLYKATQEYQDGDLQQAIALAKLI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC PSHSNVYPDAQATIDEWQQQWQTAAKQYSLAEQALLENRWSDVFVAASEVPNISYWQSKV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH KDVVQKANVNIEAQTQDLLAKAYDKARAKDFSSALEYLRQIPQESSAGALVQKKLAEYNQ HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KKQIRAAYFLHQARKQALAGNFDHAVNYLRKIPQGTPVYAQAQAKLNEYTQKLRPQIQKA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KSLIAHNSVIQVGNLQSEIQLPEVNIR HHHHHHCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MIGKVLQARYQIVQNLGSGVFGQTYIAVDINYPHQPKCVVKQLKVNSFHSSHLDTIRLRF CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEE LTETETLKHLGQHPQIPNFIACFEENERFYLVQEYIGGHALTAELPIAQNWGSVWREDEV EHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHHHCCEEEEECCCCHHCHHHHHCCCHH ITFLEDALSILQFVHSQGVIHCDVKPENLIRRAVNGKLVLIDFGSIQSVNFGIDEQVSIY HHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCEEE QVPATSLGYIPPEQFIGKTQINSDIYALGMIAIQALTGLEPLQLKIDPDSNEIIWRFADT ECCCCCCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCC PVSDYLAAILSQMIRYNFQERFQSAAEVLRVLQQMKWETSLPQLLQTQQIEYRQEPNSEA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC SPLITGMKVGLAVNTLLMGLGTYSLLSNSPANTETELLYKATQEYQDGDLQQAIALAKLI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC PSHSNVYPDAQATIDEWQQQWQTAAKQYSLAEQALLENRWSDVFVAASEVPNISYWQSKV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH KDVVQKANVNIEAQTQDLLAKAYDKARAKDFSSALEYLRQIPQESSAGALVQKKLAEYNQ HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KKQIRAAYFLHQARKQALAGNFDHAVNYLRKIPQGTPVYAQAQAKLNEYTQKLRPQIQKA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KSLIAHNSVIQVGNLQSEIQLPEVNIR HHHHHHCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7505448; 11759840 [H]