| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231179
Identifier: 17231179
GI number: 17231179
Start: 4447103
End: 4447483
Strand: Reverse
Name: 17231179
Synonym: all3687
Alternate gene names: NA
Gene position: 4447483-4447103 (Counterclockwise)
Preceding gene: 17231180
Following gene: 17231174
Centisome position: 69.34
GC content: 39.63
Gene sequence:
>381_bases ATGATTAAAACAGTAGTCAATTTAACACAACAATCCGTCTTAGGGGAGATTGAAAATGTTTTAGATACATATCCATATCA TCCTTATCAACAAGCATTTGCAATTCCCGATTTGCGCCAAGAGCTAATCGCTTTTGTTCTCAATCGTATTCCATGCCTTT ATAGCGCCATATCTGACGAACAGTTACTCATACCAAGTTGTGAGCAAGAAAGCTGGTGGAACAACAAATTACCTCGTAGT CCTTTAGAGCAGCAACAACACCTACAACGGTTGATTCACCAAGGTATTTATTCTATATTCCAAGAAAAATCAGACTGGAT CAGTCACCACCTTTGTGAATCGGTACAAGTAGGCTGCGAGCCATCTCACTGGTTTGGTTAA
Upstream 100 bases:
>100_bases CAAAGATAAATTCTAAATAGTTGCCCGGAAAAGATTGGTATTTAGAATGTTTATTCTTTGCAGAAATCGAACTAACAAAT AGATAAAAAAGGAGTTAAAA
Downstream 100 bases:
>100_bases GTATTAGTCAGTAGTCAGTAGTCAGTAGCCATTAGTCATTGATGATTAAATAAAAATCTAAGACTGTGGACTATTAACTA TTGACTACTCACAAGTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MIKTVVNLTQQSVLGEIENVLDTYPYHPYQQAFAIPDLRQELIAFVLNRIPCLYSAISDEQLLIPSCEQESWWNNKLPRS PLEQQQHLQRLIHQGIYSIFQEKSDWISHHLCESVQVGCEPSHWFG
Sequences:
>Translated_126_residues MIKTVVNLTQQSVLGEIENVLDTYPYHPYQQAFAIPDLRQELIAFVLNRIPCLYSAISDEQLLIPSCEQESWWNNKLPRS PLEQQQHLQRLIHQGIYSIFQEKSDWISHHLCESVQVGCEPSHWFG >Mature_126_residues MIKTVVNLTQQSVLGEIENVLDTYPYHPYQQAFAIPDLRQELIAFVLNRIPCLYSAISDEQLLIPSCEQESWWNNKLPRS PLEQQQHLQRLIHQGIYSIFQEKSDWISHHLCESVQVGCEPSHWFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14733; Mature: 14733
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTVVNLTQQSVLGEIENVLDTYPYHPYQQAFAIPDLRQELIAFVLNRIPCLYSAISDE CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC QLLIPSCEQESWWNNKLPRSPLEQQQHLQRLIHQGIYSIFQEKSDWISHHLCESVQVGCE CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSHWFG CCCCCC >Mature Secondary Structure MIKTVVNLTQQSVLGEIENVLDTYPYHPYQQAFAIPDLRQELIAFVLNRIPCLYSAISDE CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC QLLIPSCEQESWWNNKLPRSPLEQQQHLQRLIHQGIYSIFQEKSDWISHHLCESVQVGCE CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSHWFG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA