| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231168
Identifier: 17231168
GI number: 17231168
Start: 4431602
End: 4433551
Strand: Direct
Name: 17231168
Synonym: alr3676
Alternate gene names: NA
Gene position: 4431602-4433551 (Clockwise)
Preceding gene: 17231164
Following gene: 17231173
Centisome position: 69.1
GC content: 45.08
Gene sequence:
>1950_bases ATGGCAAACTACTGGGCGATCGCCATAGGCGTTAATCAATATCAATTATTTCAACCTTTACTTTGCGCCCAAGCCGATGC CGAGGCGCTAAAGGACTTTTTGGTTCACCAAGCAGGTTTTGTCAACCAACGCTGCTTGCTCATGACGGATACATCGCCAC CAATTGACGATAGATCCACCTATCCAACTAAAGAAAATATATTGCTGTTGCTGGAAGATTTAGCCGCAGCTTGTTGGCAG CCAGAAGACCATTTATGGTTCTTCTTTAGCGGTTATGGAGTCAACTACAACGGCAGAGACTATTTAATGCCCACAGAAGG CGACCCCAAGCTGGTAGAAGAAACTGGCATAGAAATGCGATCGCTGATGCAAAGTTTGCAGCTAGCTAACCTCAATGTTT TGCTGCTGTTTGATATCAACCGTGCTTCTGCAAGCTTTGGGGATATTCCCGTGGGCAAAGAAATCATCGAACTAGCTGAA GAACTACAACTGTCCACCATTCTTTCCTGTCAACCAGACCAGTTTTCTCAGGAAAGTAGAGAGCTAGGCCACGGCATATT TACAGGCGCATTATTATCAGCCTTGCGTTCTGGTTACGGCAGTAATTTAGGAGAATTAGAAAAATACTTAGGTGTTTTGA CTCCCGAACTATCTCAGCATTACTGGCGACCTACACAAAATCCTGTAGCCTTTATCCCCTTTGAAGAACAGGCAATTTTA CCCCCAGTAGAAACAACAAGCAATCCTGAAGTAGAACTGAGCGCCGCCGTACCTAGTACCTTAGAACCTTCGGAAGCCGA ACCTATTATTTTTTCAGAAGAAAGTTTTGCTGTAGCCTTAACAGCACCATCCTTGGGGGAATCCCCTAGAACAACCTCCA AGCCCCCAAAATTTGGGAAATGGGAAGACTCTCCCAGGTTTGAAACTAACGGTAATGGCAAATCACCCACTGTCACCCTA GATAGACAGCTATTTCCCATAAATACTGACTTCCCCCAACTATACCAACCACCTATACCCGACGAGGAAGAAACAGGCGG GAGGTTCATCCCCAATGCTCCCCAACCCTACATCTCTCGCCTACCAAGCAATAAGCCAGAGCCTCCATTATGGAGACAGT TTTTGCTGTGGGGAGGTGGAACTATGGTCGTTGTAGCGTTAATTTCTATTATTCTCCTGCGTAATCAAGCCAGAGTTTTA AGAGCCAGACAGCAACTACCTACTGTTACTAGTGATTCACAAATCATTCAGACTCCCTCAACTCCTCGTCCAGTAGCCAA GGTAGCCCCACTCAATCGACCAAAGAATCAGTCAACTGCCCAAATCGCCCCTATTTCTGAATCTAAAAAACGTAATCAAG CCGTATTAGACCTAGCAAAAATGTCTTTGAGACAGACTCAAGCTAGCGATCTCAGCTTGGCGATCGCCACTGCTAAGAAA ATTAAACCCGGCGAACCACTCTACGAACAAGCCCAGGAAAATATTAAGATTTGGACTCGGATGATTCTCGATTTAGCAGA AGGTCGCGCCAAACAAAGACAATATGCCAATGCGATCGCAGCTGCTAAATTAATTCCCAAAGACGAAGCACTCTATCCCC AAGCTCAAACAACAATTTCCCAGTGGCGCTCAGAAGCTAAACAGTTTCTAGCTAATCAAACCCTGATAGATGCCGCTAAC GCCTTAATTAAACAAGGGCAAGCTTCCACTTATAACCGTGCCATCGAAGTAGCCAAAAGAGTACCCCAAGGGCAACCAGG CTTTGATTTGGCACAAATATCTATTAATCAATGGAGTGAAAAAATTCTTGACCTCGCTAAAAATCGCGCCGATCAAGAAA ATTTTAGTGCTGCAATTGCAACTGCTACCTTAGTCCCAGAAGGAACAGCTGTCTACGAAGATGCTCAAGAAGCCATCCAG AAATGGGAAGCGAGAAAAAAGAGTCAATAG
Upstream 100 bases:
>100_bases AATGAGAATCTCCTAGACTATTAGACATAGGTTAGCTTTGTTTTTTCAGCAAAGCCAACCGCAATTTTAGGCAAGCACAC AACAACCTACAAAGAGCGGG
Downstream 100 bases:
>100_bases TTATTAGTTCAAAACCCCACATTTTCCGCTAATGACTAACAATACTGTGATACATCCTCGCCGCATTCATCAGCTAAATA GCACAGCGCCCGGAAACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MANYWAIAIGVNQYQLFQPLLCAQADAEALKDFLVHQAGFVNQRCLLMTDTSPPIDDRSTYPTKENILLLLEDLAAACWQ PEDHLWFFFSGYGVNYNGRDYLMPTEGDPKLVEETGIEMRSLMQSLQLANLNVLLLFDINRASASFGDIPVGKEIIELAE ELQLSTILSCQPDQFSQESRELGHGIFTGALLSALRSGYGSNLGELEKYLGVLTPELSQHYWRPTQNPVAFIPFEEQAIL PPVETTSNPEVELSAAVPSTLEPSEAEPIIFSEESFAVALTAPSLGESPRTTSKPPKFGKWEDSPRFETNGNGKSPTVTL DRQLFPINTDFPQLYQPPIPDEEETGGRFIPNAPQPYISRLPSNKPEPPLWRQFLLWGGGTMVVVALISIILLRNQARVL RARQQLPTVTSDSQIIQTPSTPRPVAKVAPLNRPKNQSTAQIAPISESKKRNQAVLDLAKMSLRQTQASDLSLAIATAKK IKPGEPLYEQAQENIKIWTRMILDLAEGRAKQRQYANAIAAAKLIPKDEALYPQAQTTISQWRSEAKQFLANQTLIDAAN ALIKQGQASTYNRAIEVAKRVPQGQPGFDLAQISINQWSEKILDLAKNRADQENFSAAIATATLVPEGTAVYEDAQEAIQ KWEARKKSQ
Sequences:
>Translated_649_residues MANYWAIAIGVNQYQLFQPLLCAQADAEALKDFLVHQAGFVNQRCLLMTDTSPPIDDRSTYPTKENILLLLEDLAAACWQ PEDHLWFFFSGYGVNYNGRDYLMPTEGDPKLVEETGIEMRSLMQSLQLANLNVLLLFDINRASASFGDIPVGKEIIELAE ELQLSTILSCQPDQFSQESRELGHGIFTGALLSALRSGYGSNLGELEKYLGVLTPELSQHYWRPTQNPVAFIPFEEQAIL PPVETTSNPEVELSAAVPSTLEPSEAEPIIFSEESFAVALTAPSLGESPRTTSKPPKFGKWEDSPRFETNGNGKSPTVTL DRQLFPINTDFPQLYQPPIPDEEETGGRFIPNAPQPYISRLPSNKPEPPLWRQFLLWGGGTMVVVALISIILLRNQARVL RARQQLPTVTSDSQIIQTPSTPRPVAKVAPLNRPKNQSTAQIAPISESKKRNQAVLDLAKMSLRQTQASDLSLAIATAKK IKPGEPLYEQAQENIKIWTRMILDLAEGRAKQRQYANAIAAAKLIPKDEALYPQAQTTISQWRSEAKQFLANQTLIDAAN ALIKQGQASTYNRAIEVAKRVPQGQPGFDLAQISINQWSEKILDLAKNRADQENFSAAIATATLVPEGTAVYEDAQEAIQ KWEARKKSQ >Mature_648_residues ANYWAIAIGVNQYQLFQPLLCAQADAEALKDFLVHQAGFVNQRCLLMTDTSPPIDDRSTYPTKENILLLLEDLAAACWQP EDHLWFFFSGYGVNYNGRDYLMPTEGDPKLVEETGIEMRSLMQSLQLANLNVLLLFDINRASASFGDIPVGKEIIELAEE LQLSTILSCQPDQFSQESRELGHGIFTGALLSALRSGYGSNLGELEKYLGVLTPELSQHYWRPTQNPVAFIPFEEQAILP PVETTSNPEVELSAAVPSTLEPSEAEPIIFSEESFAVALTAPSLGESPRTTSKPPKFGKWEDSPRFETNGNGKSPTVTLD RQLFPINTDFPQLYQPPIPDEEETGGRFIPNAPQPYISRLPSNKPEPPLWRQFLLWGGGTMVVVALISIILLRNQARVLR ARQQLPTVTSDSQIIQTPSTPRPVAKVAPLNRPKNQSTAQIAPISESKKRNQAVLDLAKMSLRQTQASDLSLAIATAKKI KPGEPLYEQAQENIKIWTRMILDLAEGRAKQRQYANAIAAAKLIPKDEALYPQAQTTISQWRSEAKQFLANQTLIDAANA LIKQGQASTYNRAIEVAKRVPQGQPGFDLAQISINQWSEKILDLAKNRADQENFSAAIATATLVPEGTAVYEDAQEAIQK WEARKKSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71975; Mature: 71844
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANYWAIAIGVNQYQLFQPLLCAQADAEALKDFLVHQAGFVNQRCLLMTDTSPPIDDRST CCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC YPTKENILLLLEDLAAACWQPEDHLWFFFSGYGVNYNGRDYLMPTEGDPKLVEETGIEMR CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHCCHHHH SLMQSLQLANLNVLLLFDINRASASFGDIPVGKEIIELAEELQLSTILSCQPDQFSQESR HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH ELGHGIFTGALLSALRSGYGSNLGELEKYLGVLTPELSQHYWRPTQNPVAFIPFEEQAIL HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCC PPVETTSNPEVELSAAVPSTLEPSEAEPIIFSEESFAVALTAPSLGESPRTTSKPPKFGK CCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC WEDSPRFETNGNGKSPTVTLDRQLFPINTDFPQLYQPPIPDEEETGGRFIPNAPQPYISR CCCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHH LPSNKPEPPLWRQFLLWGGGTMVVVALISIILLRNQARVLRARQQLPTVTSDSQIIQTPS CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC TPRPVAKVAPLNRPKNQSTAQIAPISESKKRNQAVLDLAKMSLRQTQASDLSLAIATAKK CCCCHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHC IKPGEPLYEQAQENIKIWTRMILDLAEGRAKQRQYANAIAAAKLIPKDEALYPQAQTTIS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH QWRSEAKQFLANQTLIDAANALIKQGQASTYNRAIEVAKRVPQGQPGFDLAQISINQWSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHH KILDLAKNRADQENFSAAIATATLVPEGTAVYEDAQEAIQKWEARKKSQ HHHHHHHCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANYWAIAIGVNQYQLFQPLLCAQADAEALKDFLVHQAGFVNQRCLLMTDTSPPIDDRST CCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC YPTKENILLLLEDLAAACWQPEDHLWFFFSGYGVNYNGRDYLMPTEGDPKLVEETGIEMR CCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHCCHHHH SLMQSLQLANLNVLLLFDINRASASFGDIPVGKEIIELAEELQLSTILSCQPDQFSQESR HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH ELGHGIFTGALLSALRSGYGSNLGELEKYLGVLTPELSQHYWRPTQNPVAFIPFEEQAIL HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCC PPVETTSNPEVELSAAVPSTLEPSEAEPIIFSEESFAVALTAPSLGESPRTTSKPPKFGK CCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC WEDSPRFETNGNGKSPTVTLDRQLFPINTDFPQLYQPPIPDEEETGGRFIPNAPQPYISR CCCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHH LPSNKPEPPLWRQFLLWGGGTMVVVALISIILLRNQARVLRARQQLPTVTSDSQIIQTPS CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC TPRPVAKVAPLNRPKNQSTAQIAPISESKKRNQAVLDLAKMSLRQTQASDLSLAIATAKK CCCCHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHC IKPGEPLYEQAQENIKIWTRMILDLAEGRAKQRQYANAIAAAKLIPKDEALYPQAQTTIS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH QWRSEAKQFLANQTLIDAANALIKQGQASTYNRAIEVAKRVPQGQPGFDLAQISINQWSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHH KILDLAKNRADQENFSAAIATATLVPEGTAVYEDAQEAIQKWEARKKSQ HHHHHHHCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA