| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is resE [H]
Identifier: 17231079
GI number: 17231079
Start: 4332137
End: 4333564
Strand: Reverse
Name: resE [H]
Synonym: all3587
Alternate gene names: 17231079
Gene position: 4333564-4332137 (Counterclockwise)
Preceding gene: 17231087
Following gene: 17231078
Centisome position: 67.57
GC content: 42.37
Gene sequence:
>1428_bases ATGTTTCAAGCTACTCGTCGCCGTCTGGCTATTTGGTACACTGCGGTAACTGCGGTATTGTTGCTGCTGTTTGCTAGTGG TGTGTATTTATATGTCCGTAGTACTTTGGTGGAACGGATCGACGATACGCTCAATCATGTAGTGGAAATAGTCGAGCGAT CGCTTGTCATTGAACCAGTGAACGGTGAGCCTGAGAAGCTACGTATTAATGTAGAGGCAAGTTTTCGCAACAATGCCAAT ACTGTAGAAGATGATCACATTGATCTGGAGTGGTTTAGCTCCACTGGTGAATTAATCTGGTCAACTTTTTCTGAACCTTT AAATATTCCTATTCACAGTAACCGCACAGGTGAAACTGTTCATGTTTTTAAACAAGACAGATGGATAAATCCAGGAACGC AAAAGCTTCTAATCCCCACTCAAGATTCAGGACTACTATTGCGACAAGTCACACAACGAGTGGAAATTGGACGGCAAGTT TTGGGATATCTGCGTGTGAGTCATCCTTGGTTTGAAGTAACTAAACCGAGTCGCCAGTTAATTTTTGACTTGGCGCTGGG TACTGGGTTAATGGTGATTTCTGTCGCGGCTAGTGGATGGTTTCTTTCGGGTAAAGCAATGGAACCAGTTGGTGAATCTT ACCAACGTCTCAAGCAATTTACTGCGGATGCTTCCCATGAACTCAGAAGTCCCATCACTTTGATTCAAACTAATGTCCAA GTTGCTTTGGCTGACTTGGATTTGACTGAATCTGAGGTTACTACCTCTTCCAATTATCGCCAACAGTTAAAGGTGGTGGA ACGGCTAACGCAGCGTTTGGGTAAGTTAGTCAATGACTTATTATTTCTAGCACGTCAGGATGGTGGTGTAAGCAGAGATG GTTTTTCATCTTGTCCGCTTGATGCTTTACTGATGGATGTGGTGGAAGAACAACAGCTTGTAGCTACAGAAAAAGCAATT ACTCTGAATCTGCACTTAATTGATCCTGCTGATTTTGAAACTAGCCCTGAAATATTAGAACATTGGTTCACACTGATAGG GAATTGGGATCAACTGATGCGATTATTTACTAATTTGATTGGTAACGCTTTACACTATACCCCCGCAGGTGGTGCGGTAA ATGTGGAACTAATGCGTATAGACAAGGTTCGCTATAATACATCACAGTTACAAATTAAGGTGAGTGATACGGGAATTGGT ATTCCGACTGAAGCATTACCGCGATTATTTGATCGTTTTTATCGAGTTGATCCTGCACGCACTCATAAGAGTGGGAATGC AGGTAAAGATAATGCTACAGGTTCAGGATTAGGACTAGCGATCGCGCAAGCTATTGTGGAACATCACCACGGTAACATTC TAGTCGAAAGCACTTTAGGTAACGGTACTACTTTTATTGTCACTTTACCCATAACTCTAGAGTCTTAA
Upstream 100 bases:
>100_bases TTTGCCATTTTATTTTTTTTACGCTGAGGGATGTAGAGTATTTGCAAGGTTCATTCAAAAAGAATTATTTTGATAGAATC AGGTTTTTTTGTATAGATCA
Downstream 100 bases:
>100_bases TTTGATAATTGATATTTGTTTCCTGTGATAGATGAATTCTACTAAATTTACATACTAATTTGTTTAGTAAGGCTTGCATT CTTTAGCCATAAATATTGCA
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MFQATRRRLAIWYTAVTAVLLLLFASGVYLYVRSTLVERIDDTLNHVVEIVERSLVIEPVNGEPEKLRINVEASFRNNAN TVEDDHIDLEWFSSTGELIWSTFSEPLNIPIHSNRTGETVHVFKQDRWINPGTQKLLIPTQDSGLLLRQVTQRVEIGRQV LGYLRVSHPWFEVTKPSRQLIFDLALGTGLMVISVAASGWFLSGKAMEPVGESYQRLKQFTADASHELRSPITLIQTNVQ VALADLDLTESEVTTSSNYRQQLKVVERLTQRLGKLVNDLLFLARQDGGVSRDGFSSCPLDALLMDVVEEQQLVATEKAI TLNLHLIDPADFETSPEILEHWFTLIGNWDQLMRLFTNLIGNALHYTPAGGAVNVELMRIDKVRYNTSQLQIKVSDTGIG IPTEALPRLFDRFYRVDPARTHKSGNAGKDNATGSGLGLAIAQAIVEHHHGNILVESTLGNGTTFIVTLPITLES
Sequences:
>Translated_475_residues MFQATRRRLAIWYTAVTAVLLLLFASGVYLYVRSTLVERIDDTLNHVVEIVERSLVIEPVNGEPEKLRINVEASFRNNAN TVEDDHIDLEWFSSTGELIWSTFSEPLNIPIHSNRTGETVHVFKQDRWINPGTQKLLIPTQDSGLLLRQVTQRVEIGRQV LGYLRVSHPWFEVTKPSRQLIFDLALGTGLMVISVAASGWFLSGKAMEPVGESYQRLKQFTADASHELRSPITLIQTNVQ VALADLDLTESEVTTSSNYRQQLKVVERLTQRLGKLVNDLLFLARQDGGVSRDGFSSCPLDALLMDVVEEQQLVATEKAI TLNLHLIDPADFETSPEILEHWFTLIGNWDQLMRLFTNLIGNALHYTPAGGAVNVELMRIDKVRYNTSQLQIKVSDTGIG IPTEALPRLFDRFYRVDPARTHKSGNAGKDNATGSGLGLAIAQAIVEHHHGNILVESTLGNGTTFIVTLPITLES >Mature_475_residues MFQATRRRLAIWYTAVTAVLLLLFASGVYLYVRSTLVERIDDTLNHVVEIVERSLVIEPVNGEPEKLRINVEASFRNNAN TVEDDHIDLEWFSSTGELIWSTFSEPLNIPIHSNRTGETVHVFKQDRWINPGTQKLLIPTQDSGLLLRQVTQRVEIGRQV LGYLRVSHPWFEVTKPSRQLIFDLALGTGLMVISVAASGWFLSGKAMEPVGESYQRLKQFTADASHELRSPITLIQTNVQ VALADLDLTESEVTTSSNYRQQLKVVERLTQRLGKLVNDLLFLARQDGGVSRDGFSSCPLDALLMDVVEEQQLVATEKAI TLNLHLIDPADFETSPEILEHWFTLIGNWDQLMRLFTNLIGNALHYTPAGGAVNVELMRIDKVRYNTSQLQIKVSDTGIG IPTEALPRLFDRFYRVDPARTHKSGNAGKDNATGSGLGLAIAQAIVEHHHGNILVESTLGNGTTFIVTLPITLES
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=273, Percent_Identity=33.6996336996337, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI1786600, Length=254, Percent_Identity=31.1023622047244, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1788393, Length=260, Percent_Identity=29.6153846153846, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789149, Length=252, Percent_Identity=30.1587301587302, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI48994928, Length=253, Percent_Identity=30.0395256916996, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790346, Length=274, Percent_Identity=28.4671532846715, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1788549, Length=315, Percent_Identity=25.3968253968254, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789403, Length=243, Percent_Identity=32.0987654320988, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788279, Length=278, Percent_Identity=26.2589928057554, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI145693157, Length=270, Percent_Identity=27.037037037037, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788713, Length=256, Percent_Identity=24.609375, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786912, Length=261, Percent_Identity=27.5862068965517, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787374, Length=259, Percent_Identity=25.4826254826255, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790861, Length=252, Percent_Identity=25.7936507936508, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1790436, Length=258, Percent_Identity=25.1937984496124, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53042; Mature: 53042
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQATRRRLAIWYTAVTAVLLLLFASGVYLYVRSTLVERIDDTLNHVVEIVERSLVIEPV CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC NGEPEKLRINVEASFRNNANTVEDDHIDLEWFSSTGELIWSTFSEPLNIPIHSNRTGETV CCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCEECCCCCCEE HVFKQDRWINPGTQKLLIPTQDSGLLLRQVTQRVEIGRQVLGYLRVSHPWFEVTKPSRQL EEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHH IFDLALGTGLMVISVAASGWFLSGKAMEPVGESYQRLKQFTADASHELRSPITLIQTNVQ HHHHHHCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCHHHHHHCCEEEEECCEE VALADLDLTESEVTTSSNYRQQLKVVERLTQRLGKLVNDLLFLARQDGGVSRDGFSSCPL EEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH DALLMDVVEEQQLVATEKAITLNLHLIDPADFETSPEILEHWFTLIGNWDQLMRLFTNLI HHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH GNALHYTPAGGAVNVELMRIDKVRYNTSQLQIKVSDTGIGIPTEALPRLFDRFYRVDPAR CCCEEECCCCCEEEEEEEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHH THKSGNAGKDNATGSGLGLAIAQAIVEHHHGNILVESTLGNGTTFIVTLPITLES CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEECC >Mature Secondary Structure MFQATRRRLAIWYTAVTAVLLLLFASGVYLYVRSTLVERIDDTLNHVVEIVERSLVIEPV CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC NGEPEKLRINVEASFRNNANTVEDDHIDLEWFSSTGELIWSTFSEPLNIPIHSNRTGETV CCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCEECCCCCCEE HVFKQDRWINPGTQKLLIPTQDSGLLLRQVTQRVEIGRQVLGYLRVSHPWFEVTKPSRQL EEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHH IFDLALGTGLMVISVAASGWFLSGKAMEPVGESYQRLKQFTADASHELRSPITLIQTNVQ HHHHHHCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCHHHHHHCCEEEEECCEE VALADLDLTESEVTTSSNYRQQLKVVERLTQRLGKLVNDLLFLARQDGGVSRDGFSSCPL EEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH DALLMDVVEEQQLVATEKAITLNLHLIDPADFETSPEILEHWFTLIGNWDQLMRLFTNLI HHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH GNALHYTPAGGAVNVELMRIDKVRYNTSQLQIKVSDTGIGIPTEALPRLFDRFYRVDPAR CCCEEECCCCCEEEEEEEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHH THKSGNAGKDNATGSGLGLAIAQAIVEHHHGNILVESTLGNGTTFIVTLPITLES CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]