| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is ybaL [C]
Identifier: 17231059
GI number: 17231059
Start: 4308470
End: 4310515
Strand: Reverse
Name: ybaL [C]
Synonym: all3567
Alternate gene names: 17231059
Gene position: 4310515-4308470 (Counterclockwise)
Preceding gene: 17231060
Following gene: 17231058
Centisome position: 67.21
GC content: 43.7
Gene sequence:
>2046_bases ATGATATTAGATGCGATCGCTATTTCTTGGCAAAGTGTAACTAATTATTCATTAGCTTCCATATTTTCCACACCGCTTAA AGACCCTGTACCCGTTTTCTTGATGATTTTGGGGATTATGTTAGTTGCTCCCCTGTTATTTGAGAAGATTCGACTACCTG GGATTGTGGGATTAATTCTCGCAGGGGTAGTAGTCGGCCCTAATGGATTGGGATTATTAGCACGAGATAATACTATTGTG CTTTTAGGCACCGTGGGTTTACTATTCTTGATGTTTATGGCTGGGCTGGAAACTAGCCTGGATGATCTGAAATATAACGC AGATAAGGCAGTCATTTTTGGACTAGCTACCTTTGCAATCCCAATGGCGTTGGGAACTGGAGCCATGATGGCAATTGGCT ATACTTTCTTGCCTGCAATTTTGGTAGCTTCTTGTTTCGCTTCTCATACTTTACTAGCCTTACCCATTGCCAGCAAATTG GGCATCATGCGTTCTCAAGTTTTGACGGCGACTCTCGGCGGTACGCTCATTACCAATATTTTGGCACTTCTGGTGTTAGC CGTGGTAGTCAGGGCGCATCAAGGGAATTTAACCCTCAGTTTTTGGTTATTCCTGATTCCGGCGTTAATTATTTACACCT TTCTCACTTTGTGGGGTGTGCCACGTATCGGACGCTGGTTTTTTCAAAGGTTTGGACATGATGAAGGGGCAGAGTTTACA TTTGTTTTGGCTACCTTGTTTGTAGTTTCTTATGGGGCAGAATTAGTCCAAATTGAGCCAATTATTGGGGCTTTTTTGGC AGGAGTGGCAATTACTCAGTTGATCCCCCAACTTAGCCCGTTGATGAACCGGATTCAATTTATCGGTAATACGCTGTTTG TCCCTTTCTTCTTAATTTCTGTGGGGATGCTGGTTAATCCTTTGATTTTGGTGCAAGAACCGCGATCGCTGGTAGTATCT GGTGTAATGGTGTCTGTGGCTATTGTTGCCAAATTTCTTCCCGCTTGGGGTTCTGGCAAGTTATTTGGCATGAATTTTAA CAACATCATGGTGATGTTTGGGTTATCAGTAGCGCAAGCCGCCTCGACTTTGGCAGCCATCACAGTGGCTTACAATATCA AGCTGGTAGACCAATTAACAGTCAATGGCACGATCGCCATGATTTTAGTTACCTGTATTGCTTCTCCTTGGGTAACAGCA AAATGGGGCAGAAATCTCAAACCAGAAGCCGATAGTATCCAAACGCGTCAAGATGGTAGGATAGGTGATCGCGTGTTAGT CCCAGTAGCTAACCCCAACACTGAAGATAATCTACTCCAGTTAGCAATTATCCTGACTAAATCTGCCTCTGGTACTTTGC TACCACTCCATATTTTACTAGAGGAAAATAACCCCATTTCTCCAGATGCTAAAGCCAAACAAAGCCAACTCCTATCCACA GCAGAAATGATTGCCCATGCGGCGGTTGTGAATGTTACCCCCATCGGCCGAATTGACGAATCTATTGACAAAGGTATTGC CCGTGTAGCTGAAGAAAAGCAAGCTAGTGCGATTATTTGCGGTTGGAAAGGCTACTCTACCTATGAGGAAAATTTATTTG GTGGTGTTATTGATAAGATTGTTCAGCGTAGTTTTATCCCCGTTTTAGTATCTCGCTTCCCCTTACCAATTGAACACACA AATCGAGTATTTTTAGCCTTTACCACCCAACAAGCCCAAGTCAGCACCTTTGGGCAAAGCATCGAATTAGCTAAAGCTTT AGCCACAGAATTGAAAGCCTCTCTCCAACTTTTACAAGTGGTAGCACTGCGAGGGGAAGCCATTGAAATAGCTGATACTG GATTACCAGCTGATACACCAATCCAGAAAGTAAGAGGTAACTTTGTCCGCCAAGTTTCTCGGTTACTCAAAACCAACGAT TTACTACTGCTGAATGGGACTGTGGAAAACAAAACTCAACTATTTGCCCTATTTGGTAACGCACCAGAAGCGATCGCCCG CACTCATCCTAAAGTAGCCATGATTATCGCCTACTTTCCACAGTAG
Upstream 100 bases:
>100_bases GGTAGGAAAATCTATATCTAACAATAGTACCAATTCGATGGGAGTTTTGAGAAGGTACTAATATTTGAGTCAATGCAAAT ATAGTGCTGTACAAACATCC
Downstream 100 bases:
>100_bases AAACTAGGGATTGGGGAGATAGGACAGATAAGGTATATTATATTCCCAATCCCCAATCCCCAATCCCCAGTCCTCAATCC CCATCTATGATTTACCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: MjNapA [H]
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MILDAIAISWQSVTNYSLASIFSTPLKDPVPVFLMILGIMLVAPLLFEKIRLPGIVGLILAGVVVGPNGLGLLARDNTIV LLGTVGLLFLMFMAGLETSLDDLKYNADKAVIFGLATFAIPMALGTGAMMAIGYTFLPAILVASCFASHTLLALPIASKL GIMRSQVLTATLGGTLITNILALLVLAVVVRAHQGNLTLSFWLFLIPALIIYTFLTLWGVPRIGRWFFQRFGHDEGAEFT FVLATLFVVSYGAELVQIEPIIGAFLAGVAITQLIPQLSPLMNRIQFIGNTLFVPFFLISVGMLVNPLILVQEPRSLVVS GVMVSVAIVAKFLPAWGSGKLFGMNFNNIMVMFGLSVAQAASTLAAITVAYNIKLVDQLTVNGTIAMILVTCIASPWVTA KWGRNLKPEADSIQTRQDGRIGDRVLVPVANPNTEDNLLQLAIILTKSASGTLLPLHILLEENNPISPDAKAKQSQLLST AEMIAHAAVVNVTPIGRIDESIDKGIARVAEEKQASAIICGWKGYSTYEENLFGGVIDKIVQRSFIPVLVSRFPLPIEHT NRVFLAFTTQQAQVSTFGQSIELAKALATELKASLQLLQVVALRGEAIEIADTGLPADTPIQKVRGNFVRQVSRLLKTND LLLLNGTVENKTQLFALFGNAPEAIARTHPKVAMIIAYFPQ
Sequences:
>Translated_681_residues MILDAIAISWQSVTNYSLASIFSTPLKDPVPVFLMILGIMLVAPLLFEKIRLPGIVGLILAGVVVGPNGLGLLARDNTIV LLGTVGLLFLMFMAGLETSLDDLKYNADKAVIFGLATFAIPMALGTGAMMAIGYTFLPAILVASCFASHTLLALPIASKL GIMRSQVLTATLGGTLITNILALLVLAVVVRAHQGNLTLSFWLFLIPALIIYTFLTLWGVPRIGRWFFQRFGHDEGAEFT FVLATLFVVSYGAELVQIEPIIGAFLAGVAITQLIPQLSPLMNRIQFIGNTLFVPFFLISVGMLVNPLILVQEPRSLVVS GVMVSVAIVAKFLPAWGSGKLFGMNFNNIMVMFGLSVAQAASTLAAITVAYNIKLVDQLTVNGTIAMILVTCIASPWVTA KWGRNLKPEADSIQTRQDGRIGDRVLVPVANPNTEDNLLQLAIILTKSASGTLLPLHILLEENNPISPDAKAKQSQLLST AEMIAHAAVVNVTPIGRIDESIDKGIARVAEEKQASAIICGWKGYSTYEENLFGGVIDKIVQRSFIPVLVSRFPLPIEHT NRVFLAFTTQQAQVSTFGQSIELAKALATELKASLQLLQVVALRGEAIEIADTGLPADTPIQKVRGNFVRQVSRLLKTND LLLLNGTVENKTQLFALFGNAPEAIARTHPKVAMIIAYFPQ >Mature_681_residues MILDAIAISWQSVTNYSLASIFSTPLKDPVPVFLMILGIMLVAPLLFEKIRLPGIVGLILAGVVVGPNGLGLLARDNTIV LLGTVGLLFLMFMAGLETSLDDLKYNADKAVIFGLATFAIPMALGTGAMMAIGYTFLPAILVASCFASHTLLALPIASKL GIMRSQVLTATLGGTLITNILALLVLAVVVRAHQGNLTLSFWLFLIPALIIYTFLTLWGVPRIGRWFFQRFGHDEGAEFT FVLATLFVVSYGAELVQIEPIIGAFLAGVAITQLIPQLSPLMNRIQFIGNTLFVPFFLISVGMLVNPLILVQEPRSLVVS GVMVSVAIVAKFLPAWGSGKLFGMNFNNIMVMFGLSVAQAASTLAAITVAYNIKLVDQLTVNGTIAMILVTCIASPWVTA KWGRNLKPEADSIQTRQDGRIGDRVLVPVANPNTEDNLLQLAIILTKSASGTLLPLHILLEENNPISPDAKAKQSQLLST AEMIAHAAVVNVTPIGRIDESIDKGIARVAEEKQASAIICGWKGYSTYEENLFGGVIDKIVQRSFIPVLVSRFPLPIEHT NRVFLAFTTQQAQVSTFGQSIELAKALATELKASLQLLQVVALRGEAIEIADTGLPADTPIQKVRGNFVRQVSRLLKTND LLLLNGTVENKTQLFALFGNAPEAIARTHPKVAMIIAYFPQ
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Escherichia coli, GI1786685, Length=340, Percent_Identity=27.6470588235294, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322367, Length=409, Percent_Identity=22.2493887530562, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 73401; Mature: 73401
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDAIAISWQSVTNYSLASIFSTPLKDPVPVFLMILGIMLVAPLLFEKIRLPGIVGLIL CCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AGVVVGPNGLGLLARDNTIVLLGTVGLLFLMFMAGLETSLDDLKYNADKAVIFGLATFAI HHHHCCCCCCEEEEECCEEEEEHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH PMALGTGAMMAIGYTFLPAILVASCFASHTLLALPIASKLGIMRSQVLTATLGGTLITNI HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LALLVLAVVVRAHQGNLTLSFWLFLIPALIIYTFLTLWGVPRIGRWFFQRFGHDEGAEFT HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHH FVLATLFVVSYGAELVQIEPIIGAFLAGVAITQLIPQLSPLMNRIQFIGNTLFVPFFLIS HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGMLVNPLILVQEPRSLVVSGVMVSVAIVAKFLPAWGSGKLFGMNFNNIMVMFGLSVAQA HHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECHHHHHH ASTLAAITVAYNIKLVDQLTVNGTIAMILVTCIASPWVTAKWGRNLKPEADSIQTRQDGR HHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCC IGDRVLVPVANPNTEDNLLQLAIILTKSASGTLLPLHILLEENNPISPDAKAKQSQLLST CCCEEEEEECCCCCCHHHEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHH AEMIAHAAVVNVTPIGRIDESIDKGIARVAEEKQASAIICGWKGYSTYEENLFGGVIDKI HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH VQRSFIPVLVSRFPLPIEHTNRVFLAFTTQQAQVSTFGQSIELAKALATELKASLQLLQV HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALRGEAIEIADTGLPADTPIQKVRGNFVRQVSRLLKTNDLLLLNGTVENKTQLFALFGN HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECC APEAIARTHPKVAMIIAYFPQ CCHHHHHCCCCEEEEEEECCC >Mature Secondary Structure MILDAIAISWQSVTNYSLASIFSTPLKDPVPVFLMILGIMLVAPLLFEKIRLPGIVGLIL CCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AGVVVGPNGLGLLARDNTIVLLGTVGLLFLMFMAGLETSLDDLKYNADKAVIFGLATFAI HHHHCCCCCCEEEEECCEEEEEHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH PMALGTGAMMAIGYTFLPAILVASCFASHTLLALPIASKLGIMRSQVLTATLGGTLITNI HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LALLVLAVVVRAHQGNLTLSFWLFLIPALIIYTFLTLWGVPRIGRWFFQRFGHDEGAEFT HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHH FVLATLFVVSYGAELVQIEPIIGAFLAGVAITQLIPQLSPLMNRIQFIGNTLFVPFFLIS HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGMLVNPLILVQEPRSLVVSGVMVSVAIVAKFLPAWGSGKLFGMNFNNIMVMFGLSVAQA HHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECHHHHHH ASTLAAITVAYNIKLVDQLTVNGTIAMILVTCIASPWVTAKWGRNLKPEADSIQTRQDGR HHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCC IGDRVLVPVANPNTEDNLLQLAIILTKSASGTLLPLHILLEENNPISPDAKAKQSQLLST CCCEEEEEECCCCCCHHHEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHH AEMIAHAAVVNVTPIGRIDESIDKGIARVAEEKQASAIICGWKGYSTYEENLFGGVIDKI HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH VQRSFIPVLVSRFPLPIEHTNRVFLAFTTQQAQVSTFGQSIELAKALATELKASLQLLQV HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALRGEAIEIADTGLPADTPIQKVRGNFVRQVSRLLKTNDLLLLNGTVENKTQLFALFGN HHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECC APEAIARTHPKVAMIIAYFPQ CCHHHHHCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]