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The map label for this gene is 17230978

Identifier: 17230978

GI number: 17230978

Start: 4201526

End: 4201909

Strand: Direct

Name: 17230978

Synonym: alr3486

Alternate gene names: NA

Gene position: 4201526-4201909 (Clockwise)

Preceding gene: 17230977

Following gene: 17230982

Centisome position: 65.51

GC content: 44.01

Gene sequence:

>384_bases
ATGTCTGTTGAACTTTACAAACAAGTCAAACAAAAACGCCAACATCCAAACCTGCCTGTTTACCAATGGAAGCGTCAACC
CCTTGAACAATGGAAAATCACTCGGCATTCTATCTACACCAGAGATGAGGGATTGTGCCAAAGTCCAAATAACCAGCCAC
CAAAAGTCAATGGATTATGTCAAAGAACAGTCAGTTTAAAGACTGCTCACATCGACTACATTCGCCCGTTGTCATCTGGT
GGTAGTAACCATGCGTCCAACTTGAGAACTCTTTGCCCCGTCTGCCATGCGCTTAGGCTTGACCGCAAGCATGATGGCAT
GAGACATAAACTGGTCAAGAAAGGTTTAATCCCTGTCAACTGGAAACAGTTTGTTTGGGATTAA

Upstream 100 bases:

>100_bases
CTTTAAATATCCGTCTCGTTTCGTCAGGTCTCCTTAAGGCGAGTCCCGTCACCTTCCGTTTCGTCACGTCATGTTGTGTC
AAGTCGAGTTTGGTTAAGTC

Downstream 100 bases:

>100_bases
ATTGTCGGCAATCGCCCGACAAGCGACTGAAACAAATGATAAAGCCCCTAGCCCTGTAAGGGCTAGGGGCTTGGGTTTTA
GGAAAAGGGTTTAGGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: TerF-Related Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSVELYKQVKQKRQHPNLPVYQWKRQPLEQWKITRHSIYTRDEGLCQSPNNQPPKVNGLCQRTVSLKTAHIDYIRPLSSG
GSNHASNLRTLCPVCHALRLDRKHDGMRHKLVKKGLIPVNWKQFVWD

Sequences:

>Translated_127_residues
MSVELYKQVKQKRQHPNLPVYQWKRQPLEQWKITRHSIYTRDEGLCQSPNNQPPKVNGLCQRTVSLKTAHIDYIRPLSSG
GSNHASNLRTLCPVCHALRLDRKHDGMRHKLVKKGLIPVNWKQFVWD
>Mature_126_residues
SVELYKQVKQKRQHPNLPVYQWKRQPLEQWKITRHSIYTRDEGLCQSPNNQPPKVNGLCQRTVSLKTAHIDYIRPLSSGG
SNHASNLRTLCPVCHALRLDRKHDGMRHKLVKKGLIPVNWKQFVWD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14901; Mature: 14770

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVELYKQVKQKRQHPNLPVYQWKRQPLEQWKITRHSIYTRDEGLCQSPNNQPPKVNGLC
CCHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
QRTVSLKTAHIDYIRPLSSGGSNHASNLRTLCPVCHALRLDRKHDGMRHKLVKKGLIPVN
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
WKQFVWD
HHHHHCC
>Mature Secondary Structure 
SVELYKQVKQKRQHPNLPVYQWKRQPLEQWKITRHSIYTRDEGLCQSPNNQPPKVNGLC
CHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
QRTVSLKTAHIDYIRPLSSGGSNHASNLRTLCPVCHALRLDRKHDGMRHKLVKKGLIPVN
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
WKQFVWD
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA