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The map label for this gene is 17230941

Identifier: 17230941

GI number: 17230941

Start: 4158067

End: 4158534

Strand: Direct

Name: 17230941

Synonym: alr3449

Alternate gene names: NA

Gene position: 4158067-4158534 (Clockwise)

Preceding gene: 17230940

Following gene: 17230942

Centisome position: 64.83

GC content: 36.11

Gene sequence:

>468_bases
ATGCTCGACAATCTGCAATTAACTGATATTTTGGCAACTGTTGCCGTCCTTGTTAGTATTACATTCCTAATTTATTTCGC
TGGAAAAACCTTAATTACTGCTAATTCATTTCAAAAAGGAGTTAGTCTTTATCAACAAAAAGATTATCCAGGTGCAGAAG
CAGCTTTTCGCAAAGTTATAGCTATCAACTCAACCAATGATGTAGTCCGCTTGTTTTTAGGAGATGTTTTAAGAGAACAA
GGTAAAGTTGCAGAAGCAACAGAATTGTTCCAAGAAGTGATTAACCGCAGCCCAAAAAATCCTCAAGGTTACTTACGTCT
AGCAACTATTCTCATGCAGCAAGAGAAACAAGCAGAAGCTAAAACTAATTTGCAAAAGGCTCAAGAATTGTTGCAAAAAC
AACGTCAACCAGAAACAGCCAAAAGGGTTGCTAAATTATTAGAGCAAATGAATACTAAGACAATCTGA

Upstream 100 bases:

>100_bases
CATGACAAAACGGCGATCGCTCAATTCTATCAATTTATTTGGAAGCTCTTTTTCCTAGAATATTTAATGTTTCCCATTGC
CTGTCTTTTAGCTTAAAACT

Downstream 100 bases:

>100_bases
GTAATATGAGTGATGTTTACGACGATGCTACCCCTACGCACTAATCTAAAATCATGACTCAACAAAATGGCAAAGTTTAC
CTTGTAGGTGCGGGGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLDNLQLTDILATVAVLVSITFLIYFAGKTLITANSFQKGVSLYQQKDYPGAEAAFRKVIAINSTNDVVRLFLGDVLREQ
GKVAEATELFQEVINRSPKNPQGYLRLATILMQQEKQAEAKTNLQKAQELLQKQRQPETAKRVAKLLEQMNTKTI

Sequences:

>Translated_155_residues
MLDNLQLTDILATVAVLVSITFLIYFAGKTLITANSFQKGVSLYQQKDYPGAEAAFRKVIAINSTNDVVRLFLGDVLREQ
GKVAEATELFQEVINRSPKNPQGYLRLATILMQQEKQAEAKTNLQKAQELLQKQRQPETAKRVAKLLEQMNTKTI
>Mature_155_residues
MLDNLQLTDILATVAVLVSITFLIYFAGKTLITANSFQKGVSLYQQKDYPGAEAAFRKVIAINSTNDVVRLFLGDVLREQ
GKVAEATELFQEVINRSPKNPQGYLRLATILMQQEKQAEAKTNLQKAQELLQKQRQPETAKRVAKLLEQMNTKTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17425; Mature: 17425

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDNLQLTDILATVAVLVSITFLIYFAGKTLITANSFQKGVSLYQQKDYPGAEAAFRKVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHCCCCCHHHHHHHHH
AINSTNDVVRLFLGDVLREQGKVAEATELFQEVINRSPKNPQGYLRLATILMQQEKQAEA
HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KTNLQKAQELLQKQRQPETAKRVAKLLEQMNTKTI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDNLQLTDILATVAVLVSITFLIYFAGKTLITANSFQKGVSLYQQKDYPGAEAAFRKVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHCCCCCHHHHHHHHH
AINSTNDVVRLFLGDVLREQGKVAEATELFQEVINRSPKNPQGYLRLATILMQQEKQAEA
HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
KTNLQKAQELLQKQRQPETAKRVAKLLEQMNTKTI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA