| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230938
Identifier: 17230938
GI number: 17230938
Start: 4155565
End: 4155948
Strand: Reverse
Name: 17230938
Synonym: all3446
Alternate gene names: NA
Gene position: 4155948-4155565 (Counterclockwise)
Preceding gene: 17230939
Following gene: 17230932
Centisome position: 64.8
GC content: 43.49
Gene sequence:
>384_bases ATGGATACCACCCATAAAGCCCAGGTCATTGCTAACGAGAAAAATCTTCTCTCAGCGATGAAAACCAATAATGTGAAACT TTTGGATAAACTGCTTCACGATGAGCTTCTGTTTAACGGGCCAAGTGGCGAAACGGCAACGAAAGCGATGGATCTGGAAA ATTACCGTTCGGGAAACATCAACCTGCATACAGTTGAATCAAGTGAGCTAATACTAAGTGTGGTCGGAGACGACGTTGTT GTTGCCGTCACAGTAGAGATACAAGGAAACTATTTAGGGCAAGAAATTAATGGCAAATTCCGCTATCTCAGGGTTTGGAA GCTATTTGAAAACAACTGGAAAGTGATTGCCGGAAGCGTGGTTACGCTAAGTACCGACAACTGA
Upstream 100 bases:
>100_bases AGTTTTTTACTCATGAATTAAGATTTTTGGAATCACTGTGGCTCTAGCCCAGTGAGAATGTTAAAGTTTTATTTTCTGTT CAAATCAAACAACAAACAGC
Downstream 100 bases:
>100_bases ACAATGCTATTGATCTGTTTCGCCTTTATTTGGGAAAAGTCTTCATCAAAAACAAATAGAATAAAATTTTTACTGTCGTC CTTATGCTAATTTAGAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MDTTHKAQVIANEKNLLSAMKTNNVKLLDKLLHDELLFNGPSGETATKAMDLENYRSGNINLHTVESSELILSVVGDDVV VAVTVEIQGNYLGQEINGKFRYLRVWKLFENNWKVIAGSVVTLSTDN
Sequences:
>Translated_127_residues MDTTHKAQVIANEKNLLSAMKTNNVKLLDKLLHDELLFNGPSGETATKAMDLENYRSGNINLHTVESSELILSVVGDDVV VAVTVEIQGNYLGQEINGKFRYLRVWKLFENNWKVIAGSVVTLSTDN >Mature_127_residues MDTTHKAQVIANEKNLLSAMKTNNVKLLDKLLHDELLFNGPSGETATKAMDLENYRSGNINLHTVESSELILSVVGDDVV VAVTVEIQGNYLGQEINGKFRYLRVWKLFENNWKVIAGSVVTLSTDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14119; Mature: 14119
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTTHKAQVIANEKNLLSAMKTNNVKLLDKLLHDELLFNGPSGETATKAMDLENYRSGNI CCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCHHEEECCCCCCCCCC NLHTVESSELILSVVGDDVVVAVTVEIQGNYLGQEINGKFRYLRVWKLFENNWKVIAGSV EEEEECCCEEEEEEECCCEEEEEEEEECCCEECCCCCCEEEEEEEEEEECCCCEEEEEEE VTLSTDN EEEEECC >Mature Secondary Structure MDTTHKAQVIANEKNLLSAMKTNNVKLLDKLLHDELLFNGPSGETATKAMDLENYRSGNI CCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCHHEEECCCCCCCCCC NLHTVESSELILSVVGDDVVVAVTVEIQGNYLGQEINGKFRYLRVWKLFENNWKVIAGSV EEEEECCCEEEEEEECCCEEEEEEEEECCCEECCCCCCEEEEEEEEEEECCCCEEEEEEE VTLSTDN EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA