| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230899
Identifier: 17230899
GI number: 17230899
Start: 4117665
End: 4118270
Strand: Direct
Name: 17230899
Synonym: alr3407
Alternate gene names: NA
Gene position: 4117665-4118270 (Clockwise)
Preceding gene: 17230898
Following gene: 17230903
Centisome position: 64.2
GC content: 33.99
Gene sequence:
>606_bases ATGAGAAGAATCAATCGAACTAAACTATTAGATCGTCAGCATGATCGAAGAGATGCAAAGCTTTTCATAGTTGCTACTGA GGGTAAAGAGACAGAAAAGCAATATTTTGGAATGTTCCATAGTACCCGAATCAAGATAGAAGTTCTGGCTACTGGGGATG ATGGTAAATCTGCTCCCCAATATGTGCTAGAACGACTGAATACCTTTAAAGATAACTATGATTTAAATGAGGAAGATATG CTTTGGCTTGTTCTTGATGTAGACAGATGGGGTGAAAATAATTTAAGTTTAGTGTGTCGTGAAGCCAAGCAAAAAAATTA TTATTTAGCTATCAGCAATCCATGTTTTGAAATTTGGTTATATTTACATTTTGATGATTTAAACTCCCAAGATAGAACTT GTAATGATTTTAAGACAAAGCTACGAAAGATTTTAGGAAGTTATAACAGTAGCAATCTAGATTTATCTGTATACAAACCT AATATTACAAATGCAACAAATCGTGCAAAATTATTGCACCCCAACTCTCAACAAAACTGGCCTCCAGAATTAGGAACACA CGTATATAGGCTAGTTGAAATTATTCTCCAGAGCTTGAATAATTGA
Upstream 100 bases:
>100_bases TTAAATGGTCGTTTTGGAGCTATTCCTTTCTTTGGAGATCCACAAAGTTTAGGGTGGTTCGATTGTGATACTGGTTTATC TGTAGGATGAGTCGCAAGTC
Downstream 100 bases:
>100_bases TTTCAGAATAAAACACAAAAAAAATGCCTCGGAAGCATCACACCCCCAAGGCAAGTAAACCTAGAAATTATTCTTAATTC CCTAAAGTTGCTTCACTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MRRINRTKLLDRQHDRRDAKLFIVATEGKETEKQYFGMFHSTRIKIEVLATGDDGKSAPQYVLERLNTFKDNYDLNEEDM LWLVLDVDRWGENNLSLVCREAKQKNYYLAISNPCFEIWLYLHFDDLNSQDRTCNDFKTKLRKILGSYNSSNLDLSVYKP NITNATNRAKLLHPNSQQNWPPELGTHVYRLVEIILQSLNN
Sequences:
>Translated_201_residues MRRINRTKLLDRQHDRRDAKLFIVATEGKETEKQYFGMFHSTRIKIEVLATGDDGKSAPQYVLERLNTFKDNYDLNEEDM LWLVLDVDRWGENNLSLVCREAKQKNYYLAISNPCFEIWLYLHFDDLNSQDRTCNDFKTKLRKILGSYNSSNLDLSVYKP NITNATNRAKLLHPNSQQNWPPELGTHVYRLVEIILQSLNN >Mature_201_residues MRRINRTKLLDRQHDRRDAKLFIVATEGKETEKQYFGMFHSTRIKIEVLATGDDGKSAPQYVLERLNTFKDNYDLNEEDM LWLVLDVDRWGENNLSLVCREAKQKNYYLAISNPCFEIWLYLHFDDLNSQDRTCNDFKTKLRKILGSYNSSNLDLSVYKP NITNATNRAKLLHPNSQQNWPPELGTHVYRLVEIILQSLNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23687; Mature: 23687
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRINRTKLLDRQHDRRDAKLFIVATEGKETEKQYFGMFHSTRIKIEVLATGDDGKSAPQ CCCCCHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHH YVLERLNTFKDNYDLNEEDMLWLVLDVDRWGENNLSLVCREAKQKNYYLAISNPCFEIWL HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHEEEEHHHCCCEEEEECCCCEEEEE YLHFDDLNSQDRTCNDFKTKLRKILGSYNSSNLDLSVYKPNITNATNRAKLLHPNSQQNW EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCC PPELGTHVYRLVEIILQSLNN CHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRINRTKLLDRQHDRRDAKLFIVATEGKETEKQYFGMFHSTRIKIEVLATGDDGKSAPQ CCCCCHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHH YVLERLNTFKDNYDLNEEDMLWLVLDVDRWGENNLSLVCREAKQKNYYLAISNPCFEIWL HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHEEEEHHHCCCEEEEECCCCEEEEE YLHFDDLNSQDRTCNDFKTKLRKILGSYNSSNLDLSVYKPNITNATNRAKLLHPNSQQNW EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCC PPELGTHVYRLVEIILQSLNN CHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA