| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is ywoG [H]
Identifier: 17230873
GI number: 17230873
Start: 4092717
End: 4093826
Strand: Direct
Name: ywoG [H]
Synonym: alr3381
Alternate gene names: 17230873
Gene position: 4092717-4093826 (Clockwise)
Preceding gene: 17230872
Following gene: 17230874
Centisome position: 63.81
GC content: 44.59
Gene sequence:
>1110_bases GTGGGAGGAAGCAAGCAAGAAATTGGCATTGTGATGGGTGGTTTTGCTATTGGGTTGTTAGTATTTCGCCCAATGCTGGG ACGACTGGCGGATCAAAACGGTCGGAAGTTGCTGTTATTAATTGGGACAATAGTGGCGACAACTGCCCCCTTTGGTTATT TGGCATTTAAATCCATTCCTTTATTGATGCTGGTGCGTGTCTTTCATGGCGTTAGCATTGCTGCTTTTACCACTGGTTAC AGTGCTTTAATAGCAGATTTAGCCCCTATGGCCATTCGTGGTGAAATCATCAGTTATATGAGTCTCACAGCTCCCCTCGG CTTGGCAATTGGCCCGGCTTTAGGGGGTTATCTACAAGCTTCAATTGGTTATCCAATTTTATTTTTAATAGCATCCGAAT TGGCTTTTTTGGGGTTATTGGGGGCGATTCAAGTTTCTAATCCACCTATGCCACAACATCGCCAAGCAACGGAAAAGGAT AGTAATTTCTGGCAACTTTTAAGTAGCCCACGGGTGAGAGTGCCGACTTTGGTGATGTTACTCATCGGTATAGCTATCGG TGCTGTACATATTTTTTTACCCCTGTTTATTAAATCAACAGGGGTGGAATTTAACGCCGGACTATTTTTTACTATCGCGG CCATTGGTAGTTTCAGTTTGCGGGTGTTTGCGGGTAAAGCTAGCGATCGCTTCGGTCGGGGTTTGTTTATTACTTTCGGT ATCATGGCTTATATGTTGTCATCCTTCTTGTTATGGCAAGCCAACAGTGCCATTAGCTTCGCTATTGCGGCGGTTGCTGA AGGTTGTGGCGGCGGAACAATGATTTCGATGATGACGACGATGATGGCAGACCGTTCACTACCACAAGAACGAGGACGGA TTTTCTCTATTTGTATCGCTGGATTGGATTTAGGGATTGCGATCGCTGCCCCTATTTTAGGTTTTATTGCTGAAGCAACT GGCTATCGCAGTATGTTTGCCTATACGACTGCTTTAACGTTCCTAGCCTTACTAATTTTTCTGACCAGTTCGAGTAAAAA CCTGACTAATTCCCTCCGCTTTGCTTTGGGTCGTGGTCAAGATGTCTATTCTCTGCATAATAGTAACTAG
Upstream 100 bases:
>100_bases AAGTTTGCGGCTTAACCTGCTGATTCTATTTACAGCAGGTTTATTGTTCTGGTCGAGTACTGCTACTTTCTTGCCTACTC TGCCCTTATATATTGAGGAT
Downstream 100 bases:
>100_bases TCAGACAAAAAATAAAGGCAGAGAAGATATTTCTCTGCCTTTATTTCTGAGACGGGCGAGGAGGGATTCGAACCCCCGAC ACCGTGGTCCGTAGCCACGT
Product: hypothetical protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MGGSKQEIGIVMGGFAIGLLVFRPMLGRLADQNGRKLLLLIGTIVATTAPFGYLAFKSIPLLMLVRVFHGVSIAAFTTGY SALIADLAPMAIRGEIISYMSLTAPLGLAIGPALGGYLQASIGYPILFLIASELAFLGLLGAIQVSNPPMPQHRQATEKD SNFWQLLSSPRVRVPTLVMLLIGIAIGAVHIFLPLFIKSTGVEFNAGLFFTIAAIGSFSLRVFAGKASDRFGRGLFITFG IMAYMLSSFLLWQANSAISFAIAAVAEGCGGGTMISMMTTMMADRSLPQERGRIFSICIAGLDLGIAIAAPILGFIAEAT GYRSMFAYTTALTFLALLIFLTSSSKNLTNSLRFALGRGQDVYSLHNSN
Sequences:
>Translated_369_residues MGGSKQEIGIVMGGFAIGLLVFRPMLGRLADQNGRKLLLLIGTIVATTAPFGYLAFKSIPLLMLVRVFHGVSIAAFTTGY SALIADLAPMAIRGEIISYMSLTAPLGLAIGPALGGYLQASIGYPILFLIASELAFLGLLGAIQVSNPPMPQHRQATEKD SNFWQLLSSPRVRVPTLVMLLIGIAIGAVHIFLPLFIKSTGVEFNAGLFFTIAAIGSFSLRVFAGKASDRFGRGLFITFG IMAYMLSSFLLWQANSAISFAIAAVAEGCGGGTMISMMTTMMADRSLPQERGRIFSICIAGLDLGIAIAAPILGFIAEAT GYRSMFAYTTALTFLALLIFLTSSSKNLTNSLRFALGRGQDVYSLHNSN >Mature_368_residues GGSKQEIGIVMGGFAIGLLVFRPMLGRLADQNGRKLLLLIGTIVATTAPFGYLAFKSIPLLMLVRVFHGVSIAAFTTGYS ALIADLAPMAIRGEIISYMSLTAPLGLAIGPALGGYLQASIGYPILFLIASELAFLGLLGAIQVSNPPMPQHRQATEKDS NFWQLLSSPRVRVPTLVMLLIGIAIGAVHIFLPLFIKSTGVEFNAGLFFTIAAIGSFSLRVFAGKASDRFGRGLFITFGI MAYMLSSFLLWQANSAISFAIAAVAEGCGGGTMISMMTTMMADRSLPQERGRIFSICIAGLDLGIAIAAPILGFIAEATG YRSMFAYTTALTFLALLIFLTSSSKNLTNSLRFALGRGQDVYSLHNSN
Specific function: Involved In Sulfonamide (Sulfathiazole) And Bicyclomycin Resistance. Probable Membrane Translocase. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 39219; Mature: 39088
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGSKQEIGIVMGGFAIGLLVFRPMLGRLADQNGRKLLLLIGTIVATTAPFGYLAFKSIP CCCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHH LLMLVRVFHGVSIAAFTTGYSALIADLAPMAIRGEIISYMSLTAPLGLAIGPALGGYLQA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH SIGYPILFLIASELAFLGLLGAIQVSNPPMPQHRQATEKDSNFWQLLSSPRVRVPTLVML HCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH LIGIAIGAVHIFLPLFIKSTGVEFNAGLFFTIAAIGSFSLRVFAGKASDRFGRGLFITFG HHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHH IMAYMLSSFLLWQANSAISFAIAAVAEGCGGGTMISMMTTMMADRSLPQERGRIFSICIA HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHH GLDLGIAIAAPILGFIAEATGYRSMFAYTTALTFLALLIFLTSSSKNLTNSLRFALGRGQ HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC DVYSLHNSN CEEECCCCC >Mature Secondary Structure GGSKQEIGIVMGGFAIGLLVFRPMLGRLADQNGRKLLLLIGTIVATTAPFGYLAFKSIP CCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHH LLMLVRVFHGVSIAAFTTGYSALIADLAPMAIRGEIISYMSLTAPLGLAIGPALGGYLQA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH SIGYPILFLIASELAFLGLLGAIQVSNPPMPQHRQATEKDSNFWQLLSSPRVRVPTLVML HCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH LIGIAIGAVHIFLPLFIKSTGVEFNAGLFFTIAAIGSFSLRVFAGKASDRFGRGLFITFG HHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHH IMAYMLSSFLLWQANSAISFAIAAVAEGCGGGTMISMMTTMMADRSLPQERGRIFSICIA HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHH GLDLGIAIAAPILGFIAEATGYRSMFAYTTALTFLALLIFLTSSSKNLTNSLRFALGRGQ HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC DVYSLHNSN CEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]