Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17230865

Identifier: 17230865

GI number: 17230865

Start: 4082294

End: 4082707

Strand: Reverse

Name: 17230865

Synonym: all3373

Alternate gene names: NA

Gene position: 4082707-4082294 (Counterclockwise)

Preceding gene: 17230866

Following gene: 17230863

Centisome position: 63.66

GC content: 31.64

Gene sequence:

>414_bases
ATGAAAAATACCGATAATCTATTAAGTGCAAATGAAATTATCTCACTGGGTAAATCATTAAGAAAAATCGAACATAAACT
ACTCAAGAAAAGTCAAAATGAGGGGAAAACTAGAATTTGGTTTCAAGGCGAAGAACCCTATTTTGATGTTTTTTTTGAGT
TTGAAGATGGCGAAATTTCCTGGTTTCAATTTACTTTGCGCGGTCAGTCACTATCTTGGGATAAAAAACTCTCAGGATTT
CAAACTGGCACTACAAATGAATTAAGTATTGATGATACGAGCTTTTATGCGGCTAGCAAGACAATTGAAAACGATAATCA
ACTAGATGGTAATTTTATTTATTTAGTCAAATCAATTATGCAAACTAAAACAGAAGAACCTGCATTTGCTCAGGCATTAA
ATTTATTTGATTAA

Upstream 100 bases:

>100_bases
TAGATAATATTAAATAATCAGCTTATTTAACCACCATTAATTTTTCCATAAATATAGCATCTACTATCTTGAATGATTAA
AATACTCCCAACTTTTAAGT

Downstream 100 bases:

>100_bases
GTAACCATCATAAACGGTGTACACCAGAACCGATGAAAAAGCCATCTTTCCTTCTCTATGTTCCCTACGGGACGCTTACG
CGTAGCGTTTCGTGGACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKNTDNLLSANEIISLGKSLRKIEHKLLKKSQNEGKTRIWFQGEEPYFDVFFEFEDGEISWFQFTLRGQSLSWDKKLSGF
QTGTTNELSIDDTSFYAASKTIENDNQLDGNFIYLVKSIMQTKTEEPAFAQALNLFD

Sequences:

>Translated_137_residues
MKNTDNLLSANEIISLGKSLRKIEHKLLKKSQNEGKTRIWFQGEEPYFDVFFEFEDGEISWFQFTLRGQSLSWDKKLSGF
QTGTTNELSIDDTSFYAASKTIENDNQLDGNFIYLVKSIMQTKTEEPAFAQALNLFD
>Mature_137_residues
MKNTDNLLSANEIISLGKSLRKIEHKLLKKSQNEGKTRIWFQGEEPYFDVFFEFEDGEISWFQFTLRGQSLSWDKKLSGF
QTGTTNELSIDDTSFYAASKTIENDNQLDGNFIYLVKSIMQTKTEEPAFAQALNLFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15810; Mature: 15810

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTDNLLSANEIISLGKSLRKIEHKLLKKSQNEGKTRIWFQGEEPYFDVFFEFEDGEIS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCEE
WFQFTLRGQSLSWDKKLSGFQTGTTNELSIDDTSFYAASKTIENDNQLDGNFIYLVKSIM
EEEEEEECCCCCCHHHCCCCCCCCCCEEECCCCCEEEHHCCCCCCCCCCCHHHHHHHHHH
QTKTEEPAFAQALNLFD
HCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKNTDNLLSANEIISLGKSLRKIEHKLLKKSQNEGKTRIWFQGEEPYFDVFFEFEDGEIS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCEE
WFQFTLRGQSLSWDKKLSGFQTGTTNELSIDDTSFYAASKTIENDNQLDGNFIYLVKSIM
EEEEEEECCCCCCHHHCCCCCCCCCCEEECCCCCEEEHHCCCCCCCCCCCHHHHHHHHHH
QTKTEEPAFAQALNLFD
HCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA