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The map label for this gene is 17230854

Identifier: 17230854

GI number: 17230854

Start: 4068269

End: 4069027

Strand: Direct

Name: 17230854

Synonym: alr3362

Alternate gene names: NA

Gene position: 4068269-4069027 (Clockwise)

Preceding gene: 17230853

Following gene: 17230855

Centisome position: 63.43

GC content: 44.8

Gene sequence:

>759_bases
ATGACTAAATCTCAAGTACCAAATAAACTGCTCTCTTGGCTAGATGTCTTGGCAATTACCGCCTGGGGCGTATTAATGCT
GAGATATTGGCTAACTGGCAAGCTCAATTTATTAATTCACCCCAATTATTTTGCATTGGTGGTTGTAGCGGGTATTGTCT
TATTAATTATTGGCTTTGCTAAAGCTCATGAACTGTGGCGCTTACGTCCTCGTGATGTCACCCCCAACCCCCAGCACATC
ACTTTTTTTGCTCCTGGCTGGGGTAGTGGCTTACTGCTATTTACGGCGATTTTAGGCTTTATTATTACACCACAAGTATT
TGCCAGTGATAAAGCACTCCAGAGGGGTGTGACAGACTTATTAAGCACCTCACGCCTGCAACCCCAATCCTTCCGCGCCT
CTACGCGTCCAGAAGAGCGATCGCTTGTAGATTGGGTACGCACAGTCAATGTCTATCCCGAACCAGACTCATATACAGGT
CAAAAAGCCAAGGTGCAAGGATTTGTCATCCATCCCCCAGATATTGGCAAAGAATATATATTCCTCGCTAGATTTGTCCT
CACCTGCTGCGCCGCAGATGCTTATCCTGTAGGTTTACCAGTCAAATTAGCAGCTAATCAAGAACGGTACTCTCCCGACA
CTTGGTTAGAAGTAGAAGGAAAAATGACCACCGAAACCTTAAGTGGTAAACGTCAATTAACGATCGCCGCTACCTCTATC
AAAAAGATTCCCCAACCAGCAAATCCATATAGTTATTAG

Upstream 100 bases:

>100_bases
ACGTTATTTGATATTTCATCAGTTGTCAGGTGTCCTTGGTCAGTTGTTTTTCTGACTATTGACCACTGGCTACTGACCAC
TGACTATTGACTAATAACCA

Downstream 100 bases:

>100_bases
TCAATAGTTAATAGTCCACAACGAACAACTGACAACCAACAACTGACCAATGACTACCAAACCCTTTCTCCAACCACTAG
ATCGCGTGGCGATCGCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTKSQVPNKLLSWLDVLAITAWGVLMLRYWLTGKLNLLIHPNYFALVVVAGIVLLIIGFAKAHELWRLRPRDVTPNPQHI
TFFAPGWGSGLLLFTAILGFIITPQVFASDKALQRGVTDLLSTSRLQPQSFRASTRPEERSLVDWVRTVNVYPEPDSYTG
QKAKVQGFVIHPPDIGKEYIFLARFVLTCCAADAYPVGLPVKLAANQERYSPDTWLEVEGKMTTETLSGKRQLTIAATSI
KKIPQPANPYSY

Sequences:

>Translated_252_residues
MTKSQVPNKLLSWLDVLAITAWGVLMLRYWLTGKLNLLIHPNYFALVVVAGIVLLIIGFAKAHELWRLRPRDVTPNPQHI
TFFAPGWGSGLLLFTAILGFIITPQVFASDKALQRGVTDLLSTSRLQPQSFRASTRPEERSLVDWVRTVNVYPEPDSYTG
QKAKVQGFVIHPPDIGKEYIFLARFVLTCCAADAYPVGLPVKLAANQERYSPDTWLEVEGKMTTETLSGKRQLTIAATSI
KKIPQPANPYSY
>Mature_251_residues
TKSQVPNKLLSWLDVLAITAWGVLMLRYWLTGKLNLLIHPNYFALVVVAGIVLLIIGFAKAHELWRLRPRDVTPNPQHIT
FFAPGWGSGLLLFTAILGFIITPQVFASDKALQRGVTDLLSTSRLQPQSFRASTRPEERSLVDWVRTVNVYPEPDSYTGQ
KAKVQGFVIHPPDIGKEYIFLARFVLTCCAADAYPVGLPVKLAANQERYSPDTWLEVEGKMTTETLSGKRQLTIAATSIK
KIPQPANPYSY

Specific function: Unknown

COG id: COG3689

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28182; Mature: 28051

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSQVPNKLLSWLDVLAITAWGVLMLRYWLTGKLNLLIHPNYFALVVVAGIVLLIIGFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH
KAHELWRLRPRDVTPNPQHITFFAPGWGSGLLLFTAILGFIITPQVFASDKALQRGVTDL
HHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHH
LSTSRLQPQSFRASTRPEERSLVDWVRTVNVYPEPDSYTGQKAKVQGFVIHPPDIGKEYI
HHHCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
FLARFVLTCCAADAYPVGLPVKLAANQERYSPDTWLEVEGKMTTETLSGKRQLTIAATSI
HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEHHHHCCCEEEEEEEHHH
KKIPQPANPYSY
HHCCCCCCCCCC
>Mature Secondary Structure 
TKSQVPNKLLSWLDVLAITAWGVLMLRYWLTGKLNLLIHPNYFALVVVAGIVLLIIGFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH
KAHELWRLRPRDVTPNPQHITFFAPGWGSGLLLFTAILGFIITPQVFASDKALQRGVTDL
HHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHH
LSTSRLQPQSFRASTRPEERSLVDWVRTVNVYPEPDSYTGQKAKVQGFVIHPPDIGKEYI
HHHCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
FLARFVLTCCAADAYPVGLPVKLAANQERYSPDTWLEVEGKMTTETLSGKRQLTIAATSI
HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEHHHHCCCEEEEEEEHHH
KKIPQPANPYSY
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA