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The map label for this gene is rcsB [C]

Identifier: 17230840

GI number: 17230840

Start: 4050503

End: 4051174

Strand: Reverse

Name: rcsB [C]

Synonym: all3348

Alternate gene names: 17230840

Gene position: 4051174-4050503 (Counterclockwise)

Preceding gene: 17230841

Following gene: 17230839

Centisome position: 63.16

GC content: 34.52

Gene sequence:

>672_bases
ATGCAGAGAATATTACAGAATATTAACAAATATAAAATTTTAGTAATTGATGATCACGAATCTGTTTTATATGCAACCTT
TCATGTCTTAAAACAACTTTATCCAGAAGCAGATATTGTCCAGGCACAAACTATAAAATCGGCCCTCAATCATACGATAA
GCGGGAAATTTGACCTCATGATAATTGATTTAGCTATGCCAGAGAAAGTTGGCAGCACTGCCCAAACTAATAATGGTCTT
CAACTTATTAAAACTTTAATGAGGCAATATCCGACTCTCAATATTGTGATTCAGACTGCTAATCCTCGTGCTTTAGTAAG
ATTAAAAGCAGCAATTAGCAATCACGAAGGTGGTTTTACAGTTGCAGATAAAAGCTTACCCATGAGTGAAATGTTAAGCA
AAGTTGATTGGTCTCTCAAAGGTTTGCATAACACACCTAAAGAGATACGTTCTGGCTTGGAAGTAAAACCAGAATGGCTA
GAGGTTTTACAACTAGCTTTTAAAGAAGGTTTACAAGATATCTTTATTGGACAAAGAATGAACGTTGCTGAAAGAACTGT
CAGGCACTATTGGAGTAAAATTTATGATGCTTTAGGAGTTTATCCAGATGAAGGCAAAAATTTAAGAATTCAATCAGAAA
TTCGTGCCAGAGAAGAAGGTTTAATTGATTAA

Upstream 100 bases:

>100_bases
CACAGCCTTGATTTTTCATTTTTATGCGTAAAACCCAATTATATTACTGATAATATAATTTACTTCATGCTGCCTTCTCA
TCAATAAGAAAAAGTTATAT

Downstream 100 bases:

>100_bases
TCAATCATTGATATTCAATATTTATTTGTCGCCAAAACAATAAATAAAAACCTATACTAAAAAAATATATATGATCCGCC
AAATTTGGACAAAAGTAAAT

Product: two-component response regulator

Products: NA

Alternate protein names: Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Two Component LuxR Family Transcriptional Regulator; Response Regulator; Two Component Transcriptional Regulator LuxR Family; Response Regulator Receiver Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQRILQNINKYKILVIDDHESVLYATFHVLKQLYPEADIVQAQTIKSALNHTISGKFDLMIIDLAMPEKVGSTAQTNNGL
QLIKTLMRQYPTLNIVIQTANPRALVRLKAAISNHEGGFTVADKSLPMSEMLSKVDWSLKGLHNTPKEIRSGLEVKPEWL
EVLQLAFKEGLQDIFIGQRMNVAERTVRHYWSKIYDALGVYPDEGKNLRIQSEIRAREEGLID

Sequences:

>Translated_223_residues
MQRILQNINKYKILVIDDHESVLYATFHVLKQLYPEADIVQAQTIKSALNHTISGKFDLMIIDLAMPEKVGSTAQTNNGL
QLIKTLMRQYPTLNIVIQTANPRALVRLKAAISNHEGGFTVADKSLPMSEMLSKVDWSLKGLHNTPKEIRSGLEVKPEWL
EVLQLAFKEGLQDIFIGQRMNVAERTVRHYWSKIYDALGVYPDEGKNLRIQSEIRAREEGLID
>Mature_223_residues
MQRILQNINKYKILVIDDHESVLYATFHVLKQLYPEADIVQAQTIKSALNHTISGKFDLMIIDLAMPEKVGSTAQTNNGL
QLIKTLMRQYPTLNIVIQTANPRALVRLKAAISNHEGGFTVADKSLPMSEMLSKVDWSLKGLHNTPKEIRSGLEVKPEWL
EVLQLAFKEGLQDIFIGQRMNVAERTVRHYWSKIYDALGVYPDEGKNLRIQSEIRAREEGLID

Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25367; Mature: 25367

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRILQNINKYKILVIDDHESVLYATFHVLKQLYPEADIVQAQTIKSALNHTISGKFDLM
CHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEE
IIDLAMPEKVGSTAQTNNGLQLIKTLMRQYPTLNIVIQTANPRALVRLKAAISNHEGGFT
EEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEE
VADKSLPMSEMLSKVDWSLKGLHNTPKEIRSGLEVKPEWLEVLQLAFKEGLQDIFIGQRM
EECCCCCHHHHHHHHCHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCC
NVAERTVRHYWSKIYDALGVYPDEGKNLRIQSEIRAREEGLID
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCC
>Mature Secondary Structure
MQRILQNINKYKILVIDDHESVLYATFHVLKQLYPEADIVQAQTIKSALNHTISGKFDLM
CHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEE
IIDLAMPEKVGSTAQTNNGLQLIKTLMRQYPTLNIVIQTANPRALVRLKAAISNHEGGFT
EEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCEE
VADKSLPMSEMLSKVDWSLKGLHNTPKEIRSGLEVKPEWLEVLQLAFKEGLQDIFIGQRM
EECCCCCHHHHHHHHCHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHCCCC
NVAERTVRHYWSKIYDALGVYPDEGKNLRIQSEIRAREEGLID
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA