| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17230815
Identifier: 17230815
GI number: 17230815
Start: 4017399
End: 4017902
Strand: Reverse
Name: 17230815
Synonym: all3323
Alternate gene names: NA
Gene position: 4017902-4017399 (Counterclockwise)
Preceding gene: 17230816
Following gene: 17230814
Centisome position: 62.64
GC content: 43.85
Gene sequence:
>504_bases ATGATTCGCACCTATCCACCAGTTAGTTTCTTTTTCGAGGTCGTTTTTCAGGGTGAAAACCTAGATAAGGATGTGGTTGA AACCCGGTTTCAGAGTGTGACTGGACTTAGTGTTGATATGCAGACTGAAACCCTCAAAGAAGGGGGTGAAAATCGTTTTG AACATATTTTACCGGTGCGAACTAAATATGATCCACTGGTGTTAAAGCGCGGTTTAGTGAATGATTCCCAGATGGTGAAG TGGTGTATGGATGCCATTCTCAACTTTGATATTCGCCCGATGAACTTGTTGGTACGGCTGCTGCATATCGAGAGGAGTGA TCCTAATCAACCACCAGAAGCGATCGCCACAGGCGGGTCTTCGACCATCGCACCTCTGATGACTTGGAAGGTAATTAATG CTTGGCCTAAAAAATGGTCGGTTTCTGAGTTCAACGCTGAACAAAACTCTATTGCTGTGGAATCGCTGGAGTTGAATTAC AGCTATTTTGAAACTTTGAAATAG
Upstream 100 bases:
>100_bases AATCAACAGACCTCAAAGGTGACGGTAACGAAGTGGCGATAGAAAGTATTGAAGTTGCCCATGAAGGGTTAACTATTCAA AATGGCTAAACTAATTTCCT
Downstream 100 bases:
>100_bases TGGGGAGTGATGAGAATAACTAACGACAACTGACAAGAGGATAAATTTATGCCGTTGGAAATTAGAGAACTAGTGATTAA GGCTTCGGTGAATGAGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Region Protein; Conserved Phage Tail Region Protein; Phage Tail Tube Protein Gp; Phospholipid/Glycerol Acyltransferase
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MIRTYPPVSFFFEVVFQGENLDKDVVETRFQSVTGLSVDMQTETLKEGGENRFEHILPVRTKYDPLVLKRGLVNDSQMVK WCMDAILNFDIRPMNLLVRLLHIERSDPNQPPEAIATGGSSTIAPLMTWKVINAWPKKWSVSEFNAEQNSIAVESLELNY SYFETLK
Sequences:
>Translated_167_residues MIRTYPPVSFFFEVVFQGENLDKDVVETRFQSVTGLSVDMQTETLKEGGENRFEHILPVRTKYDPLVLKRGLVNDSQMVK WCMDAILNFDIRPMNLLVRLLHIERSDPNQPPEAIATGGSSTIAPLMTWKVINAWPKKWSVSEFNAEQNSIAVESLELNY SYFETLK >Mature_167_residues MIRTYPPVSFFFEVVFQGENLDKDVVETRFQSVTGLSVDMQTETLKEGGENRFEHILPVRTKYDPLVLKRGLVNDSQMVK WCMDAILNFDIRPMNLLVRLLHIERSDPNQPPEAIATGGSSTIAPLMTWKVINAWPKKWSVSEFNAEQNSIAVESLELNY SYFETLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19186; Mature: 19186
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTYPPVSFFFEVVFQGENLDKDVVETRFQSVTGLSVDMQTETLKEGGENRFEHILPVR CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECHHHHHHCCCCCHHHHHCCCC TKYDPLVLKRGLVNDSQMVKWCMDAILNFDIRPMNLLVRLLHIERSDPNQPPEAIATGGS CCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCC STIAPLMTWKVINAWPKKWSVSEFNAEQNSIAVESLELNYSYFETLK CCHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEECCHHHHHHCC >Mature Secondary Structure MIRTYPPVSFFFEVVFQGENLDKDVVETRFQSVTGLSVDMQTETLKEGGENRFEHILPVR CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECHHHHHHCCCCCHHHHHCCCC TKYDPLVLKRGLVNDSQMVKWCMDAILNFDIRPMNLLVRLLHIERSDPNQPPEAIATGGS CCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCC STIAPLMTWKVINAWPKKWSVSEFNAEQNSIAVESLELNYSYFETLK CCHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA