Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is epsO [H]

Identifier: 17230763

GI number: 17230763

Start: 3943014

End: 3944132

Strand: Reverse

Name: epsO [H]

Synonym: all3271

Alternate gene names: 17230763

Gene position: 3944132-3943014 (Counterclockwise)

Preceding gene: 17230764

Following gene: 17230762

Centisome position: 61.49

GC content: 34.05

Gene sequence:

>1119_bases
ATGACAATTTATACAAATCATCAACTGAAGGAATATTTGCACAAATCCTTAGGACAAATGGAGAGTTTTGAATCATGTGC
ATTCCTAGACTATCCAGCATATCCCAACATAGGAGATCACTTAATATGGCTTGGTGGTGTATTCTATCTAACTAAAGTTA
AAGGTGTAAAAATAAAATATGCTTCTAGTGTGGGTGATTTTTCTCCTACCACTTTAAAAGAGAAAGCTAAGAACTCCCCT
ATAGTTCTTACGGGAGGCGGAAATTTAGGAGATTTATGGCCTGATTATCAGAATTTTCGGGAATACATTATTTCTACGTA
TCGCGATCGCCCAATTGTCATCTTACCCCAAAGTATATATTTCCGTGATTCTGCGAATTTAAAAAAAGCAGCAGATATAT
TTAATGGTCATCCCAATTTAACTTTATTTACTCGTGATGAACGTAGTTACAAGTTGGCAAGTGAAGCTTTTGATAAATGT
CATATTTTTAAGGCCCCAGATATGGCTTTTCAAATGACTGATTTACCTAGTATTCATGATATTGTTACTCCCAAATCGTC
GATTCTATATCTTTGTAGGCAAGATAAAGAACTAAATCAAGAATTTACAGAAAATATGTGGGAAATTCCCAATTTACAAA
TTGATGATTGGGCTTCATATCAATGGAAAGTAGGACATCCTAACAACCTACTTATGCGTTATGGATCTGCTTTATTTAGA
GAAGGATGGCAAAAAGGCTTGGCAAATCCATCTGATTGGCTTTCTAGACAAAAATGGCAATACTTGCATCCATATACTAA
TATTTTCCAAGAATTATACAATCCAAAAATGCACCAGTATTCATGGAGTTTAATGCACAGTGGCATTTACCAACTCCAAC
AACATAAGCTAGTAATAACTAACCGATTACATGGACATATTCTCTCTACACTTTTAAAAATACCTCATATTTTCTTTCCA
AACAGTTACTACAAAAATGAATCTTTTTACCAGGCTTGGACAAAGCAGATTCCATTTTGTAAATTTGTTAAAGATACTTC
TCAGATAAAAAACTCCATTCAGCAAGTATTGGAATCAAGTGAACGAGGAGGAATCCAACAAGAAAAAGTGGAAATTTGA

Upstream 100 bases:

>100_bases
AAATAAATTAAGAAATTACTTTGTTTATAAATGAAATATGAGTATGATATCTAAGTAAGTACTGATAGTACTTTTACGAA
GTTGTTTATACTGCGAACAT

Downstream 100 bases:

>100_bases
TATTTATTCACAGTTAACTCTTTTATCAACATTTTTATAAGATCAGGGTGTGTTCTAATGAGTGAAATTCATGTATGGCA
AGAGCCAATAGTTGAGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKYASSVGDFSPTTLKEKAKNSP
IVLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIYFRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKC
HIFKAPDMAFQMTDLPSIHDIVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFR
EGWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVITNRLHGHILSTLLKIPHIFFP
NSYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESSERGGIQQEKVEI

Sequences:

>Translated_372_residues
MTIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKYASSVGDFSPTTLKEKAKNSP
IVLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIYFRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKC
HIFKAPDMAFQMTDLPSIHDIVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFR
EGWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVITNRLHGHILSTLLKIPHIFFP
NSYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESSERGGIQQEKVEI
>Mature_371_residues
TIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKYASSVGDFSPTTLKEKAKNSPI
VLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIYFRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKCH
IFKAPDMAFQMTDLPSIHDIVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFRE
GWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVITNRLHGHILSTLLKIPHIFFPN
SYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESSERGGIQQEKVEI

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG5039

COG function: function code GM; Exopolysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007345 [H]

Pfam domain/function: PF04230 PS_pyruv_trans [H]

EC number: NA

Molecular weight: Translated: 43536; Mature: 43405

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKY
CEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCEEEEE
ASSVGDFSPTTLKEKAKNSPIVLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIY
ECCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEE
FRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKCHIFKAPDMAFQMTDLPSIHD
ECCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCHHH
IVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFR
HCCCCHHEEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCHHHHHHHHHHHH
EGWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVIT
HHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEH
NRLHGHILSTLLKIPHIFFPNSYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESS
HHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ERGGIQQEKVEI
HCCCCCHHHCCC
>Mature Secondary Structure 
TIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKY
EEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCEEEEE
ASSVGDFSPTTLKEKAKNSPIVLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIY
ECCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEE
FRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKCHIFKAPDMAFQMTDLPSIHD
ECCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCHHH
IVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFR
HCCCCHHEEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCHHHHHHHHHHHH
EGWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVIT
HHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEH
NRLHGHILSTLLKIPHIFFPNSYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESS
HHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ERGGIQQEKVEI
HCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]