| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is epsO [H]
Identifier: 17230763
GI number: 17230763
Start: 3943014
End: 3944132
Strand: Reverse
Name: epsO [H]
Synonym: all3271
Alternate gene names: 17230763
Gene position: 3944132-3943014 (Counterclockwise)
Preceding gene: 17230764
Following gene: 17230762
Centisome position: 61.49
GC content: 34.05
Gene sequence:
>1119_bases ATGACAATTTATACAAATCATCAACTGAAGGAATATTTGCACAAATCCTTAGGACAAATGGAGAGTTTTGAATCATGTGC ATTCCTAGACTATCCAGCATATCCCAACATAGGAGATCACTTAATATGGCTTGGTGGTGTATTCTATCTAACTAAAGTTA AAGGTGTAAAAATAAAATATGCTTCTAGTGTGGGTGATTTTTCTCCTACCACTTTAAAAGAGAAAGCTAAGAACTCCCCT ATAGTTCTTACGGGAGGCGGAAATTTAGGAGATTTATGGCCTGATTATCAGAATTTTCGGGAATACATTATTTCTACGTA TCGCGATCGCCCAATTGTCATCTTACCCCAAAGTATATATTTCCGTGATTCTGCGAATTTAAAAAAAGCAGCAGATATAT TTAATGGTCATCCCAATTTAACTTTATTTACTCGTGATGAACGTAGTTACAAGTTGGCAAGTGAAGCTTTTGATAAATGT CATATTTTTAAGGCCCCAGATATGGCTTTTCAAATGACTGATTTACCTAGTATTCATGATATTGTTACTCCCAAATCGTC GATTCTATATCTTTGTAGGCAAGATAAAGAACTAAATCAAGAATTTACAGAAAATATGTGGGAAATTCCCAATTTACAAA TTGATGATTGGGCTTCATATCAATGGAAAGTAGGACATCCTAACAACCTACTTATGCGTTATGGATCTGCTTTATTTAGA GAAGGATGGCAAAAAGGCTTGGCAAATCCATCTGATTGGCTTTCTAGACAAAAATGGCAATACTTGCATCCATATACTAA TATTTTCCAAGAATTATACAATCCAAAAATGCACCAGTATTCATGGAGTTTAATGCACAGTGGCATTTACCAACTCCAAC AACATAAGCTAGTAATAACTAACCGATTACATGGACATATTCTCTCTACACTTTTAAAAATACCTCATATTTTCTTTCCA AACAGTTACTACAAAAATGAATCTTTTTACCAGGCTTGGACAAAGCAGATTCCATTTTGTAAATTTGTTAAAGATACTTC TCAGATAAAAAACTCCATTCAGCAAGTATTGGAATCAAGTGAACGAGGAGGAATCCAACAAGAAAAAGTGGAAATTTGA
Upstream 100 bases:
>100_bases AAATAAATTAAGAAATTACTTTGTTTATAAATGAAATATGAGTATGATATCTAAGTAAGTACTGATAGTACTTTTACGAA GTTGTTTATACTGCGAACAT
Downstream 100 bases:
>100_bases TATTTATTCACAGTTAACTCTTTTATCAACATTTTTATAAGATCAGGGTGTGTTCTAATGAGTGAAATTCATGTATGGCA AGAGCCAATAGTTGAGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKYASSVGDFSPTTLKEKAKNSP IVLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIYFRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKC HIFKAPDMAFQMTDLPSIHDIVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFR EGWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVITNRLHGHILSTLLKIPHIFFP NSYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESSERGGIQQEKVEI
Sequences:
>Translated_372_residues MTIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKYASSVGDFSPTTLKEKAKNSP IVLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIYFRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKC HIFKAPDMAFQMTDLPSIHDIVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFR EGWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVITNRLHGHILSTLLKIPHIFFP NSYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESSERGGIQQEKVEI >Mature_371_residues TIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKYASSVGDFSPTTLKEKAKNSPI VLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIYFRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKCH IFKAPDMAFQMTDLPSIHDIVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFRE GWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVITNRLHGHILSTLLKIPHIFFPN SYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESSERGGIQQEKVEI
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG5039
COG function: function code GM; Exopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007345 [H]
Pfam domain/function: PF04230 PS_pyruv_trans [H]
EC number: NA
Molecular weight: Translated: 43536; Mature: 43405
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKY CEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCEEEEE ASSVGDFSPTTLKEKAKNSPIVLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIY ECCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEE FRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKCHIFKAPDMAFQMTDLPSIHD ECCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCHHH IVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFR HCCCCHHEEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCHHHHHHHHHHHH EGWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVIT HHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEH NRLHGHILSTLLKIPHIFFPNSYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESS HHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ERGGIQQEKVEI HCCCCCHHHCCC >Mature Secondary Structure TIYTNHQLKEYLHKSLGQMESFESCAFLDYPAYPNIGDHLIWLGGVFYLTKVKGVKIKY EEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHEECCEEEEE ASSVGDFSPTTLKEKAKNSPIVLTGGGNLGDLWPDYQNFREYIISTYRDRPIVILPQSIY ECCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEE FRDSANLKKAADIFNGHPNLTLFTRDERSYKLASEAFDKCHIFKAPDMAFQMTDLPSIHD ECCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCEEEECCCCCHHH IVTPKSSILYLCRQDKELNQEFTENMWEIPNLQIDDWASYQWKVGHPNNLLMRYGSALFR HCCCCHHEEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCHHHHHHHHHHHH EGWQKGLANPSDWLSRQKWQYLHPYTNIFQELYNPKMHQYSWSLMHSGIYQLQQHKLVIT HHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEH NRLHGHILSTLLKIPHIFFPNSYYKNESFYQAWTKQIPFCKFVKDTSQIKNSIQQVLESS HHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ERGGIQQEKVEI HCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]