| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is gltX [H]
Identifier: 17230697
GI number: 17230697
Start: 3870802
End: 3872244
Strand: Reverse
Name: gltX [H]
Synonym: all3205
Alternate gene names: 17230697
Gene position: 3872244-3870802 (Counterclockwise)
Preceding gene: 17230698
Following gene: 17230690
Centisome position: 60.37
GC content: 46.78
Gene sequence:
>1443_bases GTGACTGTTAGAGTCAGAATCGCCCCTAGTCCAACAGGGAATTTACACATTGGTACAGCTAGAACAGCCGTATTTAACTG GCTGTTTGCCCGCCACCACGGCGGCACATTTATTTTACGAATTGAAGACACAGATTTAGAGCGATCGCGTCCCGAATACA CGGAAAATATCATGACGGGATTGCGTTGGTTAGGGTTGAATTGGGATGAGGGGCCATTTTTCCAATCCCAACGCCTCGAC CTTTATCAAAAAGCCGTAAAACAACTTTTAGATCAGGGTTTAGCCTATCGCTGCTACACCACATCAGAAGAACTAGAAGC CCTACGAGAAGGGCAAAAAGCTAAAGGTGAAGCCCCGCGTTACGACAACCGTCACCGCCACCTTACCCCAGAACAAGAAG CCGAATTTAAAGCCCAAGGACGCAGTTTTGTCATCCGCTTTAAAATCGATGATGAGCGAGAAATCGTCTGGAATGACTTA GTACGGGGTAAGATGTCTTGGCGAGGCAGTGATTTAGGCGGTGATATGGTCATCGCCCGTGCTTCCGAAAATGATACTGG TCAGCCGTTATATAATTTCGTTGTGGTGATTGATGACATCGATATGCAAATCAGTCATGTCATCCGGGGAGAAGACCACA TTGCCAATACAGCCAAGCAAATTCTGCTATACGAAGCCTTTGGGGCAAAAATCCCAGAGTTCGCCCATACTCCCCTAATT TTAAATATGGAAGGGCGTAAGCTCTCCAAGCGGGATGGAGTGACTTCCATTTCTGACTTTAAGCAAATGGGTTTCACATC CGAAGGTTTAGTCAACTACATGACCTTGCTTGGTTGGTCGCCACCAGATTCTACCCAAGAAATATTTACCTTAGAAGCAG CCGCCAAAGAATTTACTTTTGAGCGGGTGAATAAAGCCGGGGCAAAATTTGACTGGGCGAAACTAGATTGGTTGAACAGT CAATATATTCACAATACCCCAGTTGATCAGTTGACTGATTTACTCATTCCCTATTGGGAAGCGGCTGGATATTCATTGGC TGGGGGACGCGATCGCCCTTGGTTAGAACAGTTGGTGGGTTTACTTAGCGCCAGCTTGACCCGGTTAACCGATGCGGTAG ATATGAGCAAACTGTTTTTTACTGAGACAGTGGAATTGAGCGAAGAAGGTAGCAAACAATTGCAGCAAGAAGGTTCTAAA GCCGTGCTTGAGGCAATTATCGCCGCCTTGGAGACTCAAGCGCAACTCACAGAAACGGCTGCCCAAGACATAATTAAGCA GGTGGTGAAAGGTCAAAATGTGAAGAAAGGTTTAGTCATGCGATCGCTCAGAGTCGCCCTCACCGGTGATGTGCATGGCC CAGACTTAATTCAATCTTGGTTGCTCTTGAATCAGATTGGCTTGGATAAGCCACGCTTGAATCAGGCGATCGCAGTTAGC TAG
Upstream 100 bases:
>100_bases AACTTTTCTGTAGAGTCCGTGTTTCCTAGATTGATCTCAGGACTCAGAAGCTTAAGTATTAAGCTAAATTTAATCATGCT TTGCGAGAGAGAGAAATACT
Downstream 100 bases:
>100_bases AACGTAATGTGGTGGGCAATGCCCACCCTACGAGATAAATTACTCAGCACTGAGATTTAAAGCTTTATACTAAAAGCGGC AACAGCTAACGCGCCCCAGC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MTVRVRIAPSPTGNLHIGTARTAVFNWLFARHHGGTFILRIEDTDLERSRPEYTENIMTGLRWLGLNWDEGPFFQSQRLD LYQKAVKQLLDQGLAYRCYTTSEELEALREGQKAKGEAPRYDNRHRHLTPEQEAEFKAQGRSFVIRFKIDDEREIVWNDL VRGKMSWRGSDLGGDMVIARASENDTGQPLYNFVVVIDDIDMQISHVIRGEDHIANTAKQILLYEAFGAKIPEFAHTPLI LNMEGRKLSKRDGVTSISDFKQMGFTSEGLVNYMTLLGWSPPDSTQEIFTLEAAAKEFTFERVNKAGAKFDWAKLDWLNS QYIHNTPVDQLTDLLIPYWEAAGYSLAGGRDRPWLEQLVGLLSASLTRLTDAVDMSKLFFTETVELSEEGSKQLQQEGSK AVLEAIIAALETQAQLTETAAQDIIKQVVKGQNVKKGLVMRSLRVALTGDVHGPDLIQSWLLLNQIGLDKPRLNQAIAVS
Sequences:
>Translated_480_residues MTVRVRIAPSPTGNLHIGTARTAVFNWLFARHHGGTFILRIEDTDLERSRPEYTENIMTGLRWLGLNWDEGPFFQSQRLD LYQKAVKQLLDQGLAYRCYTTSEELEALREGQKAKGEAPRYDNRHRHLTPEQEAEFKAQGRSFVIRFKIDDEREIVWNDL VRGKMSWRGSDLGGDMVIARASENDTGQPLYNFVVVIDDIDMQISHVIRGEDHIANTAKQILLYEAFGAKIPEFAHTPLI LNMEGRKLSKRDGVTSISDFKQMGFTSEGLVNYMTLLGWSPPDSTQEIFTLEAAAKEFTFERVNKAGAKFDWAKLDWLNS QYIHNTPVDQLTDLLIPYWEAAGYSLAGGRDRPWLEQLVGLLSASLTRLTDAVDMSKLFFTETVELSEEGSKQLQQEGSK AVLEAIIAALETQAQLTETAAQDIIKQVVKGQNVKKGLVMRSLRVALTGDVHGPDLIQSWLLLNQIGLDKPRLNQAIAVS >Mature_479_residues TVRVRIAPSPTGNLHIGTARTAVFNWLFARHHGGTFILRIEDTDLERSRPEYTENIMTGLRWLGLNWDEGPFFQSQRLDL YQKAVKQLLDQGLAYRCYTTSEELEALREGQKAKGEAPRYDNRHRHLTPEQEAEFKAQGRSFVIRFKIDDEREIVWNDLV RGKMSWRGSDLGGDMVIARASENDTGQPLYNFVVVIDDIDMQISHVIRGEDHIANTAKQILLYEAFGAKIPEFAHTPLIL NMEGRKLSKRDGVTSISDFKQMGFTSEGLVNYMTLLGWSPPDSTQEIFTLEAAAKEFTFERVNKAGAKFDWAKLDWLNSQ YIHNTPVDQLTDLLIPYWEAAGYSLAGGRDRPWLEQLVGLLSASLTRLTDAVDMSKLFFTETVELSEEGSKQLQQEGSKA VLEAIIAALETQAQLTETAAQDIIKQVVKGQNVKKGLVMRSLRVALTGDVHGPDLIQSWLLLNQIGLDKPRLNQAIAVS
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=488, Percent_Identity=35.2459016393443, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI62241042, Length=290, Percent_Identity=25.5172413793103, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1788743, Length=456, Percent_Identity=41.8859649122807, Blast_Score=355, Evalue=3e-99, Organism=Escherichia coli, GI226510925, Length=255, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1786895, Length=351, Percent_Identity=25.3561253561254, Blast_Score=87, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71993394, Length=472, Percent_Identity=30.7203389830508, Blast_Score=206, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324540, Length=466, Percent_Identity=32.4034334763949, Blast_Score=240, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6324742, Length=134, Percent_Identity=35.8208955223881, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321192, Length=298, Percent_Identity=23.8255033557047, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24665321, Length=475, Percent_Identity=36.8421052631579, Blast_Score=269, Evalue=4e-72,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 54153; Mature: 54022
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRVRIAPSPTGNLHIGTARTAVFNWLFARHHGGTFILRIEDTDLERSRPEYTENIMTG CEEEEEECCCCCCCEEECHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCHHHHHHHHH LRWLGLNWDEGPFFQSQRLDLYQKAVKQLLDQGLAYRCYTTSEELEALREGQKAKGEAPR HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHCCCCCCC YDNRHRHLTPEQEAEFKAQGRSFVIRFKIDDEREIVWNDLVRGKMSWRGSDLGGDMVIAR CCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEE ASENDTGQPLYNFVVVIDDIDMQISHVIRGEDHIANTAKQILLYEAFGAKIPEFAHTPLI CCCCCCCCCEEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE LNMEGRKLSKRDGVTSISDFKQMGFTSEGLVNYMTLLGWSPPDSTQEIFTLEAAAKEFTF EEECCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHH ERVNKAGAKFDWAKLDWLNSQYIHNTPVDQLTDLLIPYWEAAGYSLAGGRDRPWLEQLVG HHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LLSASLTRLTDAVDMSKLFFTETVELSEEGSKQLQQEGSKAVLEAIIAALETQAQLTETA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AQDIIKQVVKGQNVKKGLVMRSLRVALTGDVHGPDLIQSWLLLNQIGLDKPRLNQAIAVS HHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECC >Mature Secondary Structure TVRVRIAPSPTGNLHIGTARTAVFNWLFARHHGGTFILRIEDTDLERSRPEYTENIMTG EEEEEECCCCCCCEEECHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCHHHHHHHHH LRWLGLNWDEGPFFQSQRLDLYQKAVKQLLDQGLAYRCYTTSEELEALREGQKAKGEAPR HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHCCCCCCC YDNRHRHLTPEQEAEFKAQGRSFVIRFKIDDEREIVWNDLVRGKMSWRGSDLGGDMVIAR CCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEE ASENDTGQPLYNFVVVIDDIDMQISHVIRGEDHIANTAKQILLYEAFGAKIPEFAHTPLI CCCCCCCCCEEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEE LNMEGRKLSKRDGVTSISDFKQMGFTSEGLVNYMTLLGWSPPDSTQEIFTLEAAAKEFTF EEECCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHH ERVNKAGAKFDWAKLDWLNSQYIHNTPVDQLTDLLIPYWEAAGYSLAGGRDRPWLEQLVG HHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LLSASLTRLTDAVDMSKLFFTETVELSEEGSKQLQQEGSKAVLEAIIAALETQAQLTETA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AQDIIKQVVKGQNVKKGLVMRSLRVALTGDVHGPDLIQSWLLLNQIGLDKPRLNQAIAVS HHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA