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The map label for this gene is crtW [H]

Identifier: 17230681

GI number: 17230681

Start: 3858986

End: 3859762

Strand: Direct

Name: crtW [H]

Synonym: alr3189

Alternate gene names: 17230681

Gene position: 3858986-3859762 (Clockwise)

Preceding gene: 17230680

Following gene: 17230687

Centisome position: 60.17

GC content: 33.85

Gene sequence:

>777_bases
ATGGTTCAGTGTCAACCATCATCTCTGCATTCAGAAAAACTGGTGTTATTGTCATCGACAATCAGAGATGATAAAAATAT
TAATAAGGGTATATTTATTGCCTGCTTTATCTTATTTTTATGGGCAATTAGTTTAATCTTATTACTCTCAATAGATACAT
CCATAATTCATAAGAGCTTATTAGGTATAGCCATGCTTTGGCAGACCTTCTTATATACAGGTTTATTTATTACTGCTCAT
GATGCCATGCACGGCGTAGTTTATCCCAAAAATCCCAGAATAAATAATTTTATAGGTAAGCTCACTCTAATCTTGTATGG
ACTACTCCCTTATAAAGATTTATTGAAAAAACATTGGTTACACCACGGACATCCTGGTACTGATTTAGACCCTGATTATT
ACAATGGTCATCCCCAAAACTTCTTTCTTTGGTATCTACATTTTATGAAGTCTTATTGGCGATGGACGCAAATTTTCGGA
TTAGTGATGATTTTTCATGGACTTAAAAATCTGGTGCATATACCAGAAAATAATTTAATTATATTTTGGATGATACCTTC
TATTTTAAGTTCAGTACAACTATTTTATTTTGGTACATTTTTGCCTCATAAAAAGCTAGAAGGTGGTTATACTAACCCCC
ATTGTGCGCGCAGTATCCCATTACCTCTTTTTTGGTCTTTTGTTACTTGTTATCACTTCGGCTACCACAAGGAACATCAC
GAATACCCTCAACTTCCTTGGTGGAAATTACCTGAAGCTCACAAAATATCTTTATAA

Upstream 100 bases:

>100_bases
TTTTAACTTCAAACTAAACGAAGTTAAAAGTAAAATCATTACCTTTAATACTTGCAAAATTCCACTGGTAATTCATTAAA
AGGTATAACGGGGTAAGAGC

Downstream 100 bases:

>100_bases
GGTGAAGATTGGATGATTGAAAAATTAGGTTACAGATACACTTGTGAGAAAAACTAAAATTTTCTCAGGCAATAAAATTA
ATTTCTGCTGGAATACGACT

Product: beta-carotene ketolase

Products: NA

Alternate protein names: Beta-carotene oxygenase [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MVQCQPSSLHSEKLVLLSSTIRDDKNINKGIFIACFILFLWAISLILLLSIDTSIIHKSLLGIAMLWQTFLYTGLFITAH
DAMHGVVYPKNPRINNFIGKLTLILYGLLPYKDLLKKHWLHHGHPGTDLDPDYYNGHPQNFFLWYLHFMKSYWRWTQIFG
LVMIFHGLKNLVHIPENNLIIFWMIPSILSSVQLFYFGTFLPHKKLEGGYTNPHCARSIPLPLFWSFVTCYHFGYHKEHH
EYPQLPWWKLPEAHKISL

Sequences:

>Translated_258_residues
MVQCQPSSLHSEKLVLLSSTIRDDKNINKGIFIACFILFLWAISLILLLSIDTSIIHKSLLGIAMLWQTFLYTGLFITAH
DAMHGVVYPKNPRINNFIGKLTLILYGLLPYKDLLKKHWLHHGHPGTDLDPDYYNGHPQNFFLWYLHFMKSYWRWTQIFG
LVMIFHGLKNLVHIPENNLIIFWMIPSILSSVQLFYFGTFLPHKKLEGGYTNPHCARSIPLPLFWSFVTCYHFGYHKEHH
EYPQLPWWKLPEAHKISL
>Mature_258_residues
MVQCQPSSLHSEKLVLLSSTIRDDKNINKGIFIACFILFLWAISLILLLSIDTSIIHKSLLGIAMLWQTFLYTGLFITAH
DAMHGVVYPKNPRINNFIGKLTLILYGLLPYKDLLKKHWLHHGHPGTDLDPDYYNGHPQNFFLWYLHFMKSYWRWTQIFG
LVMIFHGLKNLVHIPENNLIIFWMIPSILSSVQLFYFGTFLPHKKLEGGYTNPHCARSIPLPLFWSFVTCYHFGYHKEHH
EYPQLPWWKLPEAHKISL

Specific function: Converts beta-carotene to canthaxanthin via echinenone [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 30314; Mature: 30314

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]