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The map label for this gene is yecS [H]

Identifier: 17230679

GI number: 17230679

Start: 3856114

End: 3857619

Strand: Direct

Name: yecS [H]

Synonym: alr3187

Alternate gene names: 17230679

Gene position: 3856114-3857619 (Clockwise)

Preceding gene: 17230677

Following gene: 17230680

Centisome position: 60.12

GC content: 39.97

Gene sequence:

>1506_bases
ATGAGTAAGCGGGTTTTTGGACGTTGGTGTCTGGTGTTGAGCTTAATTTGTTTGTTTCTGACTGGTTGTAGTGGCAATTT
AAGTCAGGGAAAAACTCTACGGATAGCAACAGAACCAGCCTTTCCACCTTTTGAGTTTACAGCACAAGGGGGAAATTTAC
AGGGTTTTTCTATAGATTTGATGAATGCGATCGCCTCTGCTGCTAATTTGAAAGTAAATTTCCAAAGTCTGCCTTTTGAT
GGGATTATCCCCGCCTTGCAAAGTAGAACTGTAGACGCGGCGATTAGTTCCATCACCATCACCGCCGAACGGGCAGAAAC
CGTTGCGTTCTCTCGTCCTTATTTTAAAGCAGGGTTAGCGATCGCTATTCGCTCCAGCAATGAAGATATTACAGGCTTTG
ACAGTCTCAAAAATAAAAAAATCGCCGTGCAGATTGGCACAACTGGCGCAGGAAAAGCCAAAAGTATTCCAGGGGCGCAA
ATTCGTAGCTTTGATTCTGCCCCCCTAGCTCTACAAGAATTACTTAATAACAATGTAGATGCAGTCATCAATGATGCGCC
TGTAACTTTATATGCCATTAACACAGGCAATTTACAAGGAATTAAAGTTGTCGAAAAGTTGCTAACAGAAGAATATTATG
GTATCGCTACAGCCCAAAATTCACCTTATTTAGCACTAATTAATGATGGTTTAAATCGGGTGCTAGCAGATGGTTCATAT
TCCCAAATTTACCAAAAATGGTTTAAGGTAGAACCCCCATCATTACCAGATAAATCACTCTATGAAAATCAAACTAATAC
TCATAAATCTGGCTCAATTAACCTCATATTACAGTTTCTCCCGACTTTATTACAAGGTGCATTAGTCACCATACAACTGA
CAATTTTATCTACGGTATTGGGTTTAATCTGTGGTACTTTAATTGCCCTGACTCGTCTTTCCCAGTTTACCCCTGCACGT
TTATTCGCTAGAGCTTACGTAGATTTTTTCCGGGGAACACCTCTGCTAGTCCAAATTTTTATGATTTATTTTGGAATACC
AGCACTTGCTCAACAACTTGGTTTTACCTTTAACTTTGACCGTTGGGTGGCTGGAGTTATTGCCTTAAGTGTAAATGCAG
CCGCCTACATTGCTGAAATTGTCCGTGCTGGTATTCAATCAATAGAAACTGGACAAACAGAAGCAGCTAAATCCTTAGGT
TTAAATCCTTGGTTGACAATGCGTTTGGTAATTTTTCCCCAAGCCTTCCGGCGAATGTTACCACCTTTGGGTAATGAGTT
TATCAGTTTGTTAAAAGATACGAGCTTAGTTGCTGTAATTGGATTTGAAGAGTTATTCCGCAAAGGGCAATTGATTGTTG
CAGACAACTATCGTGCTTTTGAAATTTATGCGGCTGTCGCTATAGTTTATTTATGTTTAACACTTTTAGCTTCTCAAGTT
CTGAGCCGTTTAGAAATGTGGATGAATCCGACCATGAAAGCTCAACAACGAAAAGCAAAAAGATAA

Upstream 100 bases:

>100_bases
ATTTCCTGATGCTGCCAATTCCCAACACCAATTTCTGTTAACTGACATATCTCATCAAAATGTCTGATAATCACCATTGT
TATAACAGGGGAGAAGTTGG

Downstream 100 bases:

>100_bases
AGATGGTGATAAAGTAATTCTGAGGAATTACTTAGGTGAGTTAACGAGGTAGTCTATATTGCACCTAAAAAACCAGCCTA
AGATTACTAAGTGAAAGATA

Product: glutamine-binding periplasmic protein of glutamine ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSKRVFGRWCLVLSLICLFLTGCSGNLSQGKTLRIATEPAFPPFEFTAQGGNLQGFSIDLMNAIASAANLKVNFQSLPFD
GIIPALQSRTVDAAISSITITAERAETVAFSRPYFKAGLAIAIRSSNEDITGFDSLKNKKIAVQIGTTGAGKAKSIPGAQ
IRSFDSAPLALQELLNNNVDAVINDAPVTLYAINTGNLQGIKVVEKLLTEEYYGIATAQNSPYLALINDGLNRVLADGSY
SQIYQKWFKVEPPSLPDKSLYENQTNTHKSGSINLILQFLPTLLQGALVTIQLTILSTVLGLICGTLIALTRLSQFTPAR
LFARAYVDFFRGTPLLVQIFMIYFGIPALAQQLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTEAAKSLG
LNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVADNYRAFEIYAAVAIVYLCLTLLASQV
LSRLEMWMNPTMKAQQRKAKR

Sequences:

>Translated_501_residues
MSKRVFGRWCLVLSLICLFLTGCSGNLSQGKTLRIATEPAFPPFEFTAQGGNLQGFSIDLMNAIASAANLKVNFQSLPFD
GIIPALQSRTVDAAISSITITAERAETVAFSRPYFKAGLAIAIRSSNEDITGFDSLKNKKIAVQIGTTGAGKAKSIPGAQ
IRSFDSAPLALQELLNNNVDAVINDAPVTLYAINTGNLQGIKVVEKLLTEEYYGIATAQNSPYLALINDGLNRVLADGSY
SQIYQKWFKVEPPSLPDKSLYENQTNTHKSGSINLILQFLPTLLQGALVTIQLTILSTVLGLICGTLIALTRLSQFTPAR
LFARAYVDFFRGTPLLVQIFMIYFGIPALAQQLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTEAAKSLG
LNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVADNYRAFEIYAAVAIVYLCLTLLASQV
LSRLEMWMNPTMKAQQRKAKR
>Mature_500_residues
SKRVFGRWCLVLSLICLFLTGCSGNLSQGKTLRIATEPAFPPFEFTAQGGNLQGFSIDLMNAIASAANLKVNFQSLPFDG
IIPALQSRTVDAAISSITITAERAETVAFSRPYFKAGLAIAIRSSNEDITGFDSLKNKKIAVQIGTTGAGKAKSIPGAQI
RSFDSAPLALQELLNNNVDAVINDAPVTLYAINTGNLQGIKVVEKLLTEEYYGIATAQNSPYLALINDGLNRVLADGSYS
QIYQKWFKVEPPSLPDKSLYENQTNTHKSGSINLILQFLPTLLQGALVTIQLTILSTVLGLICGTLIALTRLSQFTPARL
FARAYVDFFRGTPLLVQIFMIYFGIPALAQQLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTEAAKSLGL
NPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVADNYRAFEIYAAVAIVYLCLTLLASQVL
SRLEMWMNPTMKAQQRKAKR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=229, Percent_Identity=46.2882096069869, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI1787030, Length=206, Percent_Identity=44.6601941747573, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1787031, Length=247, Percent_Identity=38.0566801619433, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1786873, Length=208, Percent_Identity=40.3846153846154, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1787088, Length=245, Percent_Identity=32.2448979591837, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=27.7272727272727, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=31.9444444444444, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=31.2775330396476, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1787085, Length=246, Percent_Identity=30.0813008130081, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1787086, Length=220, Percent_Identity=32.2727272727273, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI87082239, Length=184, Percent_Identity=34.7826086956522, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=28.110599078341, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=33.0143540669856, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI48994930, Length=160, Percent_Identity=37.5, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788649, Length=257, Percent_Identity=28.4046692607004, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788648, Length=238, Percent_Identity=27.7310924369748, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 54788; Mature: 54657

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00041 HTH_ARAC_FAMILY_1 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRVFGRWCLVLSLICLFLTGCSGNLSQGKTLRIATEPAFPPFEFTAQGGNLQGFSIDL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHHH
MNAIASAANLKVNFQSLPFDGIIPALQSRTVDAAISSITITAERAETVAFSRPYFKAGLA
HHHHHHHHCEEEEEECCCCHHHHHHHHHCHHHHHHHHEEEEEHHHHHHHCCCCHHHCCEE
IAIRSSNEDITGFDSLKNKKIAVQIGTTGAGKAKSIPGAQIRSFDSAPLALQELLNNNVD
EEEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCC
AVINDAPVTLYAINTGNLQGIKVVEKLLTEEYYGIATAQNSPYLALINDGLNRVLADGSY
EEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHCCCCH
SQIYQKWFKVEPPSLPDKSLYENQTNTHKSGSINLILQFLPTLLQGALVTIQLTILSTVL
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GLICGTLIALTRLSQFTPARLFARAYVDFFRGTPLLVQIFMIYFGIPALAQQLGFTFNFD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCHH
RWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTEAAKSLGLNPWLTMRLVIFPQAFRRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHC
PPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVADNYRAFEIYAAVAIVYLCLTLLASQV
CCCCHHHHHHHCCCCEEEEECHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
LSRLEMWMNPTMKAQQRKAKR
HHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure 
SKRVFGRWCLVLSLICLFLTGCSGNLSQGKTLRIATEPAFPPFEFTAQGGNLQGFSIDL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHHH
MNAIASAANLKVNFQSLPFDGIIPALQSRTVDAAISSITITAERAETVAFSRPYFKAGLA
HHHHHHHHCEEEEEECCCCHHHHHHHHHCHHHHHHHHEEEEEHHHHHHHCCCCHHHCCEE
IAIRSSNEDITGFDSLKNKKIAVQIGTTGAGKAKSIPGAQIRSFDSAPLALQELLNNNVD
EEEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCC
AVINDAPVTLYAINTGNLQGIKVVEKLLTEEYYGIATAQNSPYLALINDGLNRVLADGSY
EEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHCCCCH
SQIYQKWFKVEPPSLPDKSLYENQTNTHKSGSINLILQFLPTLLQGALVTIQLTILSTVL
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GLICGTLIALTRLSQFTPARLFARAYVDFFRGTPLLVQIFMIYFGIPALAQQLGFTFNFD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCHH
RWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTEAAKSLGLNPWLTMRLVIFPQAFRRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHC
PPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVADNYRAFEIYAAVAIVYLCLTLLASQV
CCCCHHHHHHHCCCCEEEEECHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
LSRLEMWMNPTMKAQQRKAKR
HHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]