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The map label for this gene is 17230579

Identifier: 17230579

GI number: 17230579

Start: 3734640

End: 3736268

Strand: Reverse

Name: 17230579

Synonym: all3087

Alternate gene names: NA

Gene position: 3736268-3734640 (Counterclockwise)

Preceding gene: 17230585

Following gene: 17230576

Centisome position: 58.25

GC content: 39.04

Gene sequence:

>1629_bases
GTGCAGATTTTCCCAGCATTTAGGAATTTTTGGGTCTTTTTTTTGATAGTGGCGATCGCTGCCTGTCAAAAAGTCCAATC
TCACAATAATCGTCCTGCACCTCTACCGCAAGACTCATTTGTGAAAGTTTACTTTAATCAATCCGAATCCTCAGAATATC
GAGAACCTTACCGTCAACAAACTCGACTGGGAGATAACTTAGAACAGCAGATTGTTGACGCTATTTCTCAAGCTAAATCT
ACTATAGATGTAGCAGTACAAGAATTGCGTTTACCTAGAATCGCCCAAGCCCTCAAAGACAAACAAAAAGCTGGCATCAA
AGTCAGAGTAATTTTAGAAAATACCTATACTCGTTCTTTGAGTAGCTTGACACCAGAGGAAGTCAAGAAATTACCTGAAC
GGGAACAAGCACGCTATCAAGAATACTTTAAATTTGTAGACCTAAACCAAGATAATCAACTCAGTCCTGAGGAACTTAAT
CAGAGGGATGCACTAATAATTTTACAAAACGCCAAAATTCCTTGGATTGATGATCAAGCTGATGGTTCAGCAGGTAGTAA
GTTGATGCACCACAAGTTTGTGGTTGTAGATAATCGCATAGTAATTGTGACTTCAGCAAACTTCACTTTAAGCGATGTTT
TCGGTGATTTTTCTAATTCTTCTAGTTTGGGAAATGCCAACAACCTATTACACATTGATAGTCCAGAATTAGCAGCTTTA
TTCACAGAAGAATTTAACCTCATGTGGGGTGATGGTGTTGGAGGTAAACCAGACAGTAAATTTGGTTTACAGAAACCTGT
TCGTTCTCCCCAAAAAATCACCTTGGGTGACAACTCAATTACTGTACATTTTTCTCCAACTTCACCCACCTTACCTTGGA
CTCAAAGCAGCAATGGCTTAATTAGTGAGACCTTAAATTTAGCGAGTAAATCTATTGATATGGCGTTGTTTGTTTTTTCT
GAACAACGCCTGGCCAATACATTAGAAAAACGTCATCAACAACAGGTCTCAATTCGAGCATTAATTGACAAACAATTCGC
TTATCGCTATTACAGCGAAGCTTTAGATATGATGGGAATTGCCCTGAGTAATAAATGCCGATATGAAATTGACAATCGAC
CTTGGTCTAATCCAGTTACTACGGTAGGCGTACCCATTTTACGTGAAGGAGACCTGCTACACCATAAATTTTCTGTCATC
GACAACCAAACAGTAATTACGGGTTCTCACAACTGGTCTGATGCAGCAAATTACGGCAATGATGAGACTTTGATAGTAAT
TAATAATCCCACAATTGCTGCTCATTATGAGCGTGAATTTGCTCGTTTGTATGCTAAAGCTCAAGTCGGTATCCCAGCCA
AAGTCCAAGCACAAATTCAACAAGAACAAAAGCAATGTGGTCAAATTCAAACTCCCACTTCCAGCGAACTGACTCCTACT
CAAGTAGTGAATATCAATACAGCAGATTTAGCAGAATTAGAAACCTTACCCGGTGTAGGTAAAAAGCTAGCTCAAAAAAT
TATCATCGCCCGTCAGCAGCAAAAATTTGTCTCATCACAAGACTTGGATAAAGTACCTGGAATTAGTCCAATGATGATAG
AAAATTGGGAAGGGCGTATTCAATTTTAG

Upstream 100 bases:

>100_bases
GGCCGAGGGGAATAAATACTGACTGTTGACTATGGATTAATCACAAATGTGGGAATTATTATGTATATGTCCATTCCCAT
CCCACTTGTAGCAGATTAAC

Downstream 100 bases:

>100_bases
TGTGTGATTTTCAATTTTTTAATCTTGCTCTTACATAATATATTTTTGCCAATAAATGAGGTAGATAACAGAAGAATTAA
ATATATAAATTCTTCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Hairpin-Helix Motif Protein; Phospholipase D/Competence Protein ComEA; Phospholipase D Active Site Motif Domain Protein; Endonuclease; Phospholipase D Domain-Containing Protein; Phosphoslipase; Competence Protein ComEA Helix-Hairpin-Helix Repeat Protein; Nuclease-Related Protein; Phospholipase D Domain Protein

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MQIFPAFRNFWVFFLIVAIAACQKVQSHNNRPAPLPQDSFVKVYFNQSESSEYREPYRQQTRLGDNLEQQIVDAISQAKS
TIDVAVQELRLPRIAQALKDKQKAGIKVRVILENTYTRSLSSLTPEEVKKLPEREQARYQEYFKFVDLNQDNQLSPEELN
QRDALIILQNAKIPWIDDQADGSAGSKLMHHKFVVVDNRIVIVTSANFTLSDVFGDFSNSSSLGNANNLLHIDSPELAAL
FTEEFNLMWGDGVGGKPDSKFGLQKPVRSPQKITLGDNSITVHFSPTSPTLPWTQSSNGLISETLNLASKSIDMALFVFS
EQRLANTLEKRHQQQVSIRALIDKQFAYRYYSEALDMMGIALSNKCRYEIDNRPWSNPVTTVGVPILREGDLLHHKFSVI
DNQTVITGSHNWSDAANYGNDETLIVINNPTIAAHYEREFARLYAKAQVGIPAKVQAQIQQEQKQCGQIQTPTSSELTPT
QVVNINTADLAELETLPGVGKKLAQKIIIARQQQKFVSSQDLDKVPGISPMMIENWEGRIQF

Sequences:

>Translated_542_residues
MQIFPAFRNFWVFFLIVAIAACQKVQSHNNRPAPLPQDSFVKVYFNQSESSEYREPYRQQTRLGDNLEQQIVDAISQAKS
TIDVAVQELRLPRIAQALKDKQKAGIKVRVILENTYTRSLSSLTPEEVKKLPEREQARYQEYFKFVDLNQDNQLSPEELN
QRDALIILQNAKIPWIDDQADGSAGSKLMHHKFVVVDNRIVIVTSANFTLSDVFGDFSNSSSLGNANNLLHIDSPELAAL
FTEEFNLMWGDGVGGKPDSKFGLQKPVRSPQKITLGDNSITVHFSPTSPTLPWTQSSNGLISETLNLASKSIDMALFVFS
EQRLANTLEKRHQQQVSIRALIDKQFAYRYYSEALDMMGIALSNKCRYEIDNRPWSNPVTTVGVPILREGDLLHHKFSVI
DNQTVITGSHNWSDAANYGNDETLIVINNPTIAAHYEREFARLYAKAQVGIPAKVQAQIQQEQKQCGQIQTPTSSELTPT
QVVNINTADLAELETLPGVGKKLAQKIIIARQQQKFVSSQDLDKVPGISPMMIENWEGRIQF
>Mature_542_residues
MQIFPAFRNFWVFFLIVAIAACQKVQSHNNRPAPLPQDSFVKVYFNQSESSEYREPYRQQTRLGDNLEQQIVDAISQAKS
TIDVAVQELRLPRIAQALKDKQKAGIKVRVILENTYTRSLSSLTPEEVKKLPEREQARYQEYFKFVDLNQDNQLSPEELN
QRDALIILQNAKIPWIDDQADGSAGSKLMHHKFVVVDNRIVIVTSANFTLSDVFGDFSNSSSLGNANNLLHIDSPELAAL
FTEEFNLMWGDGVGGKPDSKFGLQKPVRSPQKITLGDNSITVHFSPTSPTLPWTQSSNGLISETLNLASKSIDMALFVFS
EQRLANTLEKRHQQQVSIRALIDKQFAYRYYSEALDMMGIALSNKCRYEIDNRPWSNPVTTVGVPILREGDLLHHKFSVI
DNQTVITGSHNWSDAANYGNDETLIVINNPTIAAHYEREFARLYAKAQVGIPAKVQAQIQQEQKQCGQIQTPTSSELTPT
QVVNINTADLAELETLPGVGKKLAQKIIIARQQQKFVSSQDLDKVPGISPMMIENWEGRIQF

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61050; Mature: 61050

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2 ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIFPAFRNFWVFFLIVAIAACQKVQSHNNRPAPLPQDSFVKVYFNQSESSEYREPYRQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
TRLGDNLEQQIVDAISQAKSTIDVAVQELRLPRIAQALKDKQKAGIKVRVILENTYTRSL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCHHHHH
SSLTPEEVKKLPEREQARYQEYFKFVDLNQDNQLSPEELNQRDALIILQNAKIPWIDDQA
HCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCC
DGSAGSKLMHHKFVVVDNRIVIVTSANFTLSDVFGDFSNSSSLGNANNLLHIDSPELAAL
CCCCCCHHHHEEEEEEECEEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEECCCHHHHH
FTEEFNLMWGDGVGGKPDSKFGLQKPVRSPQKITLGDNSITVHFSPTSPTLPWTQSSNGL
HHHHCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCH
ISETLNLASKSIDMALFVFSEQRLANTLEKRHQQQVSIRALIDKQFAYRYYSEALDMMGI
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSNKCRYEIDNRPWSNPVTTVGVPILREGDLLHHKFSVIDNQTVITGSHNWSDAANYGN
HHCCCCEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHEECCCEEEECCCCCCCHHCCCC
DETLIVINNPTIAAHYEREFARLYAKAQVGIPAKVQAQIQQEQKQCGQIQTPTSSELTPT
CCEEEEECCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE
QVVNINTADLAELETLPGVGKKLAQKIIIARQQQKFVSSQDLDKVPGISPMMIENWEGRI
EEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCC
QF
CC
>Mature Secondary Structure
MQIFPAFRNFWVFFLIVAIAACQKVQSHNNRPAPLPQDSFVKVYFNQSESSEYREPYRQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
TRLGDNLEQQIVDAISQAKSTIDVAVQELRLPRIAQALKDKQKAGIKVRVILENTYTRSL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECCHHHHH
SSLTPEEVKKLPEREQARYQEYFKFVDLNQDNQLSPEELNQRDALIILQNAKIPWIDDQA
HCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCC
DGSAGSKLMHHKFVVVDNRIVIVTSANFTLSDVFGDFSNSSSLGNANNLLHIDSPELAAL
CCCCCCHHHHEEEEEEECEEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEECCCHHHHH
FTEEFNLMWGDGVGGKPDSKFGLQKPVRSPQKITLGDNSITVHFSPTSPTLPWTQSSNGL
HHHHCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCH
ISETLNLASKSIDMALFVFSEQRLANTLEKRHQQQVSIRALIDKQFAYRYYSEALDMMGI
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSNKCRYEIDNRPWSNPVTTVGVPILREGDLLHHKFSVIDNQTVITGSHNWSDAANYGN
HHCCCCEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHEECCCEEEECCCCCCCHHCCCC
DETLIVINNPTIAAHYEREFARLYAKAQVGIPAKVQAQIQQEQKQCGQIQTPTSSELTPT
CCEEEEECCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE
QVVNINTADLAELETLPGVGKKLAQKIIIARQQQKFVSSQDLDKVPGISPMMIENWEGRI
EEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCCC
QF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA