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The map label for this gene is yibD [C]

Identifier: 17230560

GI number: 17230560

Start: 3717602

End: 3718552

Strand: Direct

Name: yibD [C]

Synonym: alr3068

Alternate gene names: 17230560

Gene position: 3717602-3718552 (Clockwise)

Preceding gene: 17230559

Following gene: 17230561

Centisome position: 57.96

GC content: 35.12

Gene sequence:

>951_bases
ATGCCTACTATATCTGTAATTATTCCTGCCTATAATGCTGAACGTACTATTTTAGAGACAATATCTTCTGTTCAGCAACA
GACATTCTCAGATTTTGATTTGATTATTATTAATGATGGTTCCACTGACCGCACTCTAGAGTTGATTCAGAATATTCGAG
ATGAGCGTTTGAAGATATTCTCTTATGAAAATGGTGGACTTTGTACAGCACGTAATCGAGGAATTTCTCATGCAAGTGGG
GAATTTATTGCTTTCCTTGATGCCGATGATTTGTGGACACACGATAAATTAGAATTGCAACTAACAGCATTACAACAACA
TCCAGAGGCGGGAGTTGCTTATAGTTGGACTTATTTTATGGATGAGCAAGGAAAATCTTCCATCCCTGGTGTTTCCCTAT
TCTTTGAGGGTGATGTCCAAGCTCATTTATTAGTTAATAATTTTCTCGCTAGTGGTTCCAATCCTCTAATTCGCAAGCAA
GCCATTGAATCTGTAGGAGAGTTTGATTCTAACTGTATGGGTTGTGCCGATTGGGATTATTGGTTACGTTTATCAGCTAC
TTGGAATTTTGTTGTAGTTCGCAAACATCAAATTTTTTATCGCCAGTCTGCCACTTCAATGTCATCTACTAAAGTTAAAA
ATATGGAAGATGATGGCCTATTTGTAGTTGAAAAAACTTTTCAGTCTGTCAAACCAGAATTGCAATATTTAAAAAATCAA
AGTTTAGCCTGGATTTATCAATATTCCACACAACAATATCTTAAGCAGAATGTCAACAATATTGATGCAGTCCGTCATGC
TAGAGAAAAATTATGGCAAGCAATTTGCTTGCACCCGCCAATTTTATTGGCACCTTATGCTCAGGATTTAATTATCTGGT
TGATAAAAAAATGGATATTAACTAAAATATATATCCTAAGAAAGAAAAATAATCCACTGATGATTAAATAA

Upstream 100 bases:

>100_bases
TTATTACAGTTTCACATGGTTTATATTCCTGAAAAATCTCACAATATTTAATGAGTATTTATTAAGGGAACATCAAAAAA
TAAATTATCCGAAAATACTT

Downstream 100 bases:

>100_bases
TCAAGAAAAATATCTTCCTTTTGGAGGTATAAGGCTTTTTAGTATTTGGATAAAATGGCTTTGGCCGTGATGTTTTAAAA
CCCATGCCGTGATTCAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MPTISVIIPAYNAERTILETISSVQQQTFSDFDLIIINDGSTDRTLELIQNIRDERLKIFSYENGGLCTARNRGISHASG
EFIAFLDADDLWTHDKLELQLTALQQHPEAGVAYSWTYFMDEQGKSSIPGVSLFFEGDVQAHLLVNNFLASGSNPLIRKQ
AIESVGEFDSNCMGCADWDYWLRLSATWNFVVVRKHQIFYRQSATSMSSTKVKNMEDDGLFVVEKTFQSVKPELQYLKNQ
SLAWIYQYSTQQYLKQNVNNIDAVRHAREKLWQAICLHPPILLAPYAQDLIIWLIKKWILTKIYILRKKNNPLMIK

Sequences:

>Translated_316_residues
MPTISVIIPAYNAERTILETISSVQQQTFSDFDLIIINDGSTDRTLELIQNIRDERLKIFSYENGGLCTARNRGISHASG
EFIAFLDADDLWTHDKLELQLTALQQHPEAGVAYSWTYFMDEQGKSSIPGVSLFFEGDVQAHLLVNNFLASGSNPLIRKQ
AIESVGEFDSNCMGCADWDYWLRLSATWNFVVVRKHQIFYRQSATSMSSTKVKNMEDDGLFVVEKTFQSVKPELQYLKNQ
SLAWIYQYSTQQYLKQNVNNIDAVRHAREKLWQAICLHPPILLAPYAQDLIIWLIKKWILTKIYILRKKNNPLMIK
>Mature_315_residues
PTISVIIPAYNAERTILETISSVQQQTFSDFDLIIINDGSTDRTLELIQNIRDERLKIFSYENGGLCTARNRGISHASGE
FIAFLDADDLWTHDKLELQLTALQQHPEAGVAYSWTYFMDEQGKSSIPGVSLFFEGDVQAHLLVNNFLASGSNPLIRKQA
IESVGEFDSNCMGCADWDYWLRLSATWNFVVVRKHQIFYRQSATSMSSTKVKNMEDDGLFVVEKTFQSVKPELQYLKNQS
LAWIYQYSTQQYLKQNVNNIDAVRHAREKLWQAICLHPPILLAPYAQDLIIWLIKKWILTKIYILRKKNNPLMIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=89, Percent_Identity=41.5730337078652, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1788372, Length=186, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787259, Length=113, Percent_Identity=29.2035398230088, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36380; Mature: 36249

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTISVIIPAYNAERTILETISSVQQQTFSDFDLIIINDGSTDRTLELIQNIRDERLKIF
CCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCEEEEE
SYENGGLCTARNRGISHASGEFIAFLDADDLWTHDKLELQLTALQQHPEAGVAYSWTYFM
EECCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEHHCCCCCCCEEEEEEEE
DEQGKSSIPGVSLFFEGDVQAHLLVNNFLASGSNPLIRKQAIESVGEFDSNCMGCADWDY
CCCCCCCCCCEEEEEECCCEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCE
WLRLSATWNFVVVRKHQIFYRQSATSMSSTKVKNMEDDGLFVVEKTFQSVKPELQYLKNQ
EEEEECEEEEEEEEEEHEEEHHCCCCCCHHHCCCCCCCCEEEEEHHHHHHCHHHHHHCCC
SLAWIYQYSTQQYLKQNVNNIDAVRHAREKLWQAICLHPPILLAPYAQDLIIWLIKKWIL
CEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH
TKIYILRKKNNPLMIK
HHEEEEEECCCCEEEC
>Mature Secondary Structure 
PTISVIIPAYNAERTILETISSVQQQTFSDFDLIIINDGSTDRTLELIQNIRDERLKIF
CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCEEEEE
SYENGGLCTARNRGISHASGEFIAFLDADDLWTHDKLELQLTALQQHPEAGVAYSWTYFM
EECCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEHHCCCCCCCEEEEEEEE
DEQGKSSIPGVSLFFEGDVQAHLLVNNFLASGSNPLIRKQAIESVGEFDSNCMGCADWDY
CCCCCCCCCCEEEEEECCCEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCE
WLRLSATWNFVVVRKHQIFYRQSATSMSSTKVKNMEDDGLFVVEKTFQSVKPELQYLKNQ
EEEEECEEEEEEEEEEHEEEHHCCCCCCHHHCCCCCCCCEEEEEHHHHHHCHHHHHHCCC
SLAWIYQYSTQQYLKQNVNNIDAVRHAREKLWQAICLHPPILLAPYAQDLIIWLIKKWIL
CEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH
TKIYILRKKNNPLMIK
HHEEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA