Click here to switch to the map view.

The map label for this gene is 17230544

Identifier: 17230544

GI number: 17230544

Start: 3694549

End: 3695355

Strand: Direct

Name: 17230544

Synonym: alr3052

Alternate gene names: NA

Gene position: 3694549-3695355 (Clockwise)

Preceding gene: 161353746

Following gene: 17230545

Centisome position: 57.6

GC content: 42.01

Gene sequence:

>807_bases
GTGAAATTGGGTTACGGGTGCAAAATGCAAAGATACTTGAAAGTACTAAAACTATTTTGGGGTGCAGCGATCGCTGCTGA
GATAGAATATCGTATCAACTTCTTCATCGCTACCCTCAGTAGTATAGGCAATTTAGCAGGCAGCCTGTTTGGACTATTCT
TGTTTTACCGGAATGGCTATACTTTTAGTGGCTGGTCATGGGAAGCAGCTTTAGTTGTGTTGGGAATTTTTACTTTACTG
CAAGGCTTTTCTGCTACTTTTCTCGCTCCCAATCTCAACCGTATTGTTCGCCATGTCCAAGAAGGGACTTTAGATTTTGT
TCTGCTCAAACCCATACGTAGTCAGTTTTGGCTTTCCACTCACACCATATCCCCGTGGGGAGTACCAGATTTAATTTTTG
GTGGAGTGATTATTGGTTATGCAGGTAAACGCCTGGGCTTGGGAATTACTAACTACCTACCAAGCATCATTCCGTTGTTG
TGTGGTGTGATAATTCTTTATAGTCTTTGGTTTATACTAGGTGCAACTAGCATTTGGTTTGTAAAAATCTATAACGCCAC
TGAGGTGTTACGGGGGTTATTAGAGGCGGGTAGATATCCGATGGTAGCTTACCCTGCCGCTTATCGCTTTTTCTTCACTT
TTATAGTTCCAGTAACATTTTTAACTACCGTTCCAGCCGAAGTTATATTAGGTAGAGTGGAAATTCCTTGGTTAATAGGC
GGATTAGTCTTGGCTGTGGTGCTTTTTTGGGCTTCTAGCAAGTTTTGGAGCTTTGCTTTGCGATTTTATACTAGCGCTTC
GAGTTAG

Upstream 100 bases:

>100_bases
CTTTGTTCACGCCAGCGTAAATAAAAATCACAGCCAGAAAAGAACGAGCGACCAAAGGAATGTATTTTTTTAACATGGTA
GATAGCTCCAGATTCAGATA

Downstream 100 bases:

>100_bases
TGAAAGCTAATTTTTTGCTGGTAGATTACGATATTTTCACACAATATTCAAAGTTATTACTGAACTGAAAATATACAAAT
ATAAATGAAGCTAGAAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKLGYGCKMQRYLKVLKLFWGAAIAAEIEYRINFFIATLSSIGNLAGSLFGLFLFYRNGYTFSGWSWEAALVVLGIFTLL
QGFSATFLAPNLNRIVRHVQEGTLDFVLLKPIRSQFWLSTHTISPWGVPDLIFGGVIIGYAGKRLGLGITNYLPSIIPLL
CGVIILYSLWFILGATSIWFVKIYNATEVLRGLLEAGRYPMVAYPAAYRFFFTFIVPVTFLTTVPAEVILGRVEIPWLIG
GLVLAVVLFWASSKFWSFALRFYTSASS

Sequences:

>Translated_268_residues
MKLGYGCKMQRYLKVLKLFWGAAIAAEIEYRINFFIATLSSIGNLAGSLFGLFLFYRNGYTFSGWSWEAALVVLGIFTLL
QGFSATFLAPNLNRIVRHVQEGTLDFVLLKPIRSQFWLSTHTISPWGVPDLIFGGVIIGYAGKRLGLGITNYLPSIIPLL
CGVIILYSLWFILGATSIWFVKIYNATEVLRGLLEAGRYPMVAYPAAYRFFFTFIVPVTFLTTVPAEVILGRVEIPWLIG
GLVLAVVLFWASSKFWSFALRFYTSASS
>Mature_268_residues
MKLGYGCKMQRYLKVLKLFWGAAIAAEIEYRINFFIATLSSIGNLAGSLFGLFLFYRNGYTFSGWSWEAALVVLGIFTLL
QGFSATFLAPNLNRIVRHVQEGTLDFVLLKPIRSQFWLSTHTISPWGVPDLIFGGVIIGYAGKRLGLGITNYLPSIIPLL
CGVIILYSLWFILGATSIWFVKIYNATEVLRGLLEAGRYPMVAYPAAYRFFFTFIVPVTFLTTVPAEVILGRVEIPWLIG
GLVLAVVLFWASSKFWSFALRFYTSASS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30023; Mature: 30023

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA