| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yqjF [C]
Identifier: 17230543
GI number: 17230543
Start: 3694114
End: 3694524
Strand: Reverse
Name: yqjF [C]
Synonym: all3051
Alternate gene names: 17230543
Gene position: 3694524-3694114 (Counterclockwise)
Preceding gene: 17230546
Following gene: 17230541
Centisome position: 57.6
GC content: 38.69
Gene sequence:
>411_bases ATGTTAAAAAAATACATTCCTTTGGTCGCTCGTTCTTTTCTGGCTGTGATTTTTATTTACGCTGGCGTGAACAAAGTCTT TAACTTTGCCCAGACTAGTGAATCTATGGCTAAAGCCGGACTACCTATAGTAGGAGTACTACTAATTTTTACTATTGCAT TTCAGATATTAGGTGGATTGTCTATTATTCTGGGCTATAAAGCAGAGATTGGCGCGATTTTACTCATCATTTTCCTCATT CCTGCTACCATCGTGTTTCACAATCCCTTCGCTGATCCTAGTCAATTCAATAATTTTTTCAAGAATTTGTCTATTATTGG CGGACTGTTACTCATCCTCGCTTATGGTTCTGGCACTCTTAGTTTAGAAGCAAGCGATCGCTCTTCTTATGTCTCACAGC CAGAGGAATAA
Upstream 100 bases:
>100_bases CAGCGATCGCTGCACCCCAAAATAGTTTTAGTACTTTCAAGTATCTTTGCATTTTGCACCCGTAACCCAATTTCACTATC TGAATCTGGAGCTATCTACC
Downstream 100 bases:
>100_bases CAATTCAAAATACCCTACGGGAAGCTAAAGCTACAAAATTCAAAATAAAACCGGATGGGATGAGGGAGGAGAAGAAACAG GGGAGGAATCAATTCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Subfamily
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLKKYIPLVARSFLAVIFIYAGVNKVFNFAQTSESMAKAGLPIVGVLLIFTIAFQILGGLSIILGYKAEIGAILLIIFLI PATIVFHNPFADPSQFNNFFKNLSIIGGLLLILAYGSGTLSLEASDRSSYVSQPEE
Sequences:
>Translated_136_residues MLKKYIPLVARSFLAVIFIYAGVNKVFNFAQTSESMAKAGLPIVGVLLIFTIAFQILGGLSIILGYKAEIGAILLIIFLI PATIVFHNPFADPSQFNNFFKNLSIIGGLLLILAYGSGTLSLEASDRSSYVSQPEE >Mature_136_residues MLKKYIPLVARSFLAVIFIYAGVNKVFNFAQTSESMAKAGLPIVGVLLIFTIAFQILGGLSIILGYKAEIGAILLIIFLI PATIVFHNPFADPSQFNNFFKNLSIIGGLLLILAYGSGTLSLEASDRSSYVSQPEE
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082210, Length=116, Percent_Identity=34.4827586206897, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14718; Mature: 14718
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKYIPLVARSFLAVIFIYAGVNKVFNFAQTSESMAKAGLPIVGVLLIFTIAFQILGGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SIILGYKAEIGAILLIIFLIPATIVFHNPFADPSQFNNFFKNLSIIGGLLLILAYGSGTL HHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE SLEASDRSSYVSQPEE EEECCCCHHCCCCCCC >Mature Secondary Structure MLKKYIPLVARSFLAVIFIYAGVNKVFNFAQTSESMAKAGLPIVGVLLIFTIAFQILGGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SIILGYKAEIGAILLIIFLIPATIVFHNPFADPSQFNNFFKNLSIIGGLLLILAYGSGTL HHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE SLEASDRSSYVSQPEE EEECCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA