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The map label for this gene is yiaD [C]

Identifier: 17230523

GI number: 17230523

Start: 3670334

End: 3672133

Strand: Reverse

Name: yiaD [C]

Synonym: all3031

Alternate gene names: 17230523

Gene position: 3672133-3670334 (Counterclockwise)

Preceding gene: 17230524

Following gene: 17230522

Centisome position: 57.25

GC content: 37.56

Gene sequence:

>1800_bases
ATGAATAATGATGCAATAGATTCTAGCAGTCAAATATCCCCTGGTAATGACTTATCATTAATTAACAAAATCACTAAAGT
TGATGATGAACTTAGTAAACTTCGGAGTTTGTTGTTGGGAGTTGAGCCAGCTAAACTTAACCAACTTTATGAACTTTTAG
ATAATCCACACATCAGACCAGAAGATATTAGTCGCTTACTTCCAGAGGCTGTGATCTTAAGATCGCAACAAGATAAACAA
CTAATTGCAGCGATGATTTCTATTGTTGAAGAAGCGATTCAAGTTTCTGTTCAACAAGATGAAAATATACTTTCAGAAGC
TTTTTTTCCAGTCATTATTCCTGCATCTCGGAAAGCGATCGCTACATTGCTCGATGAAATGATGCAATCCCTCAACCAAG
CTCTAGAGCATAGTTTTTCCTGGGAAAGTTTGCAATGGCGACTAGAAGCGAAACGTACAGGAAAACCATTTGCAGAAATA
GTTTTATTGCGGACATTAGTTTATCGAGTAGAACAGATATTCTTAATACATAAAAATACAGGATTATTGTTGCAACATCT
TGTAGCCAATCAAGTAACCAGCCAAGACCCAGATTTAGTGGTGGCGATGTTGACCGCTATTCAAGACTTTATCAAAGATT
CTTTTAGTGTTCAAAAAACAGATCAATTGCAAAGTTTGCGTTTTGGAGAACTGCGAATCTGGATTACAGAAGGGCCACAA
GCCTTATTAGCGGCGACAATCCGGGGTAATCCCCCCCAAGAATTGAGATTAAGTCTGCAAACAGCAATTGAAAAAATTCA
TCTCAAGCTGAGTCGAGAGATGAAAGACTTTGCTGGGGATGCAAAACCATTTCAAGTATGTCAGCCTTATTTAGAATCTT
GCCTAATCAGCCAGTATAAATTTAAATCTGCGTCAAAAAAAAGTTACAAATACGCTTGGACTTTTTTAGGTATTATAGCG
ATCGCCTGTGGGATTTGGAGTTTTCTTGCTGTCAGAGAGCAATTACGTTGGCGTGCTTACTTGCAAGAACTCGATTCTCA
ACCCGGTATTGTGGTAACTGACACCAAACAGCAGTTCGGTAAATATTTTATCTCTGGATTGCGTGATCCCTTGGCATCAG
ATCCCCATACCTTACTACAACAAACAAAACTCAATCCTCAAACAATTGTCAGTCATTGGCAAAGTTATTTATCTTTAGAA
CCCCAGTTGATGATAAAAAGGGTAAATAAATTACTCCAACCTCCACCTACTGCATCACTAAGAATTGATCATAATGGCGT
TCTCTATGCTGTTGGCTCTGCACCCCGTCAATGGATTTTAGCCACACGTAAATCATGGTCTGTAATACCCGGATTAACTC
AATTTCAAGATCAGGATCTTGTAGAAAGCGAATTAAACGAATTAGCAATATACCAAAGTCAAATTGAGCGAGAAATTATC
TTTTTTCCAGAAGGCTCTCAAGAAATTATTCCTAGTGAATTATCTAAATTAAATAACTTAGTATTAGCAATTAAAAAACT
TTTACCCATCGCTAAATATCTAGAGAAAGATGTACATATTCAAATAATAGGACATACTAATACTACTGGTACAGAATCAA
GGAATGCTCAACTGAGCGCAGGACGCAGTCAGAGAGTTTTATCTTATCTATCTTCTCAAGGGATTAGCACCAGCCAGTTA
CAAGTATTAGGAGTAAGTTCTAGCCAACCTTTGCAGCCAGAATTGACAGATGAAGGTAAAAAATTTAATCGCAGAGTGTC
TTTCAAGGTCATAATTATGAGGGTTGGCAGCTCGAAATAA

Upstream 100 bases:

>100_bases
TTACTTAAGAGGTAAATATTGCCAGATATATTCTAATTCTCCTGGCTAGTTTGCCTAAAAAATTATCTAATTATAGAGTG
TAGTTTGGGGGATTATATTA

Downstream 100 bases:

>100_bases
ATCAAACTCAAGGGTATGATTCAAAAAAAGATTTGTATGGTGGGTGCATTTGCTACTGGTAAAACTAGTTTAGTAGCTAG
ATTTGTTTATAGTATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA/MotB Domain-Containing Protein; Outer Membrane Protein A

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MNNDAIDSSSQISPGNDLSLINKITKVDDELSKLRSLLLGVEPAKLNQLYELLDNPHIRPEDISRLLPEAVILRSQQDKQ
LIAAMISIVEEAIQVSVQQDENILSEAFFPVIIPASRKAIATLLDEMMQSLNQALEHSFSWESLQWRLEAKRTGKPFAEI
VLLRTLVYRVEQIFLIHKNTGLLLQHLVANQVTSQDPDLVVAMLTAIQDFIKDSFSVQKTDQLQSLRFGELRIWITEGPQ
ALLAATIRGNPPQELRLSLQTAIEKIHLKLSREMKDFAGDAKPFQVCQPYLESCLISQYKFKSASKKSYKYAWTFLGIIA
IACGIWSFLAVREQLRWRAYLQELDSQPGIVVTDTKQQFGKYFISGLRDPLASDPHTLLQQTKLNPQTIVSHWQSYLSLE
PQLMIKRVNKLLQPPPTASLRIDHNGVLYAVGSAPRQWILATRKSWSVIPGLTQFQDQDLVESELNELAIYQSQIEREII
FFPEGSQEIIPSELSKLNNLVLAIKKLLPIAKYLEKDVHIQIIGHTNTTGTESRNAQLSAGRSQRVLSYLSSQGISTSQL
QVLGVSSSQPLQPELTDEGKKFNRRVSFKVIIMRVGSSK

Sequences:

>Translated_599_residues
MNNDAIDSSSQISPGNDLSLINKITKVDDELSKLRSLLLGVEPAKLNQLYELLDNPHIRPEDISRLLPEAVILRSQQDKQ
LIAAMISIVEEAIQVSVQQDENILSEAFFPVIIPASRKAIATLLDEMMQSLNQALEHSFSWESLQWRLEAKRTGKPFAEI
VLLRTLVYRVEQIFLIHKNTGLLLQHLVANQVTSQDPDLVVAMLTAIQDFIKDSFSVQKTDQLQSLRFGELRIWITEGPQ
ALLAATIRGNPPQELRLSLQTAIEKIHLKLSREMKDFAGDAKPFQVCQPYLESCLISQYKFKSASKKSYKYAWTFLGIIA
IACGIWSFLAVREQLRWRAYLQELDSQPGIVVTDTKQQFGKYFISGLRDPLASDPHTLLQQTKLNPQTIVSHWQSYLSLE
PQLMIKRVNKLLQPPPTASLRIDHNGVLYAVGSAPRQWILATRKSWSVIPGLTQFQDQDLVESELNELAIYQSQIEREII
FFPEGSQEIIPSELSKLNNLVLAIKKLLPIAKYLEKDVHIQIIGHTNTTGTESRNAQLSAGRSQRVLSYLSSQGISTSQL
QVLGVSSSQPLQPELTDEGKKFNRRVSFKVIIMRVGSSK
>Mature_599_residues
MNNDAIDSSSQISPGNDLSLINKITKVDDELSKLRSLLLGVEPAKLNQLYELLDNPHIRPEDISRLLPEAVILRSQQDKQ
LIAAMISIVEEAIQVSVQQDENILSEAFFPVIIPASRKAIATLLDEMMQSLNQALEHSFSWESLQWRLEAKRTGKPFAEI
VLLRTLVYRVEQIFLIHKNTGLLLQHLVANQVTSQDPDLVVAMLTAIQDFIKDSFSVQKTDQLQSLRFGELRIWITEGPQ
ALLAATIRGNPPQELRLSLQTAIEKIHLKLSREMKDFAGDAKPFQVCQPYLESCLISQYKFKSASKKSYKYAWTFLGIIA
IACGIWSFLAVREQLRWRAYLQELDSQPGIVVTDTKQQFGKYFISGLRDPLASDPHTLLQQTKLNPQTIVSHWQSYLSLE
PQLMIKRVNKLLQPPPTASLRIDHNGVLYAVGSAPRQWILATRKSWSVIPGLTQFQDQDLVESELNELAIYQSQIEREII
FFPEGSQEIIPSELSKLNNLVLAIKKLLPIAKYLEKDVHIQIIGHTNTTGTESRNAQLSAGRSQRVLSYLSSQGISTSQL
QVLGVSSSQPLQPELTDEGKKFNRRVSFKVIIMRVGSSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67624; Mature: 67624

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDAIDSSSQISPGNDLSLINKITKVDDELSKLRSLLLGVEPAKLNQLYELLDNPHIRP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH
EDISRLLPEAVILRSQQDKQLIAAMISIVEEAIQVSVQQDENILSEAFFPVIIPASRKAI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH
ATLLDEMMQSLNQALEHSFSWESLQWRLEAKRTGKPFAEIVLLRTLVYRVEQIFLIHKNT
HHHHHHHHHHHHHHHHHCCCHHHHHEEEEHHCCCCHHHHHHHHHHHHHHHHHEEEEECCC
GLLLQHLVANQVTSQDPDLVVAMLTAIQDFIKDSFSVQKTDQLQSLRFGELRIWITEGPQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCH
ALLAATIRGNPPQELRLSLQTAIEKIHLKLSREMKDFAGDAKPFQVCQPYLESCLISQYK
HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FKSASKKSYKYAWTFLGIIAIACGIWSFLAVREQLRWRAYLQELDSQPGIVVTDTKQQFG
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHH
KYFISGLRDPLASDPHTLLQQTKLNPQTIVSHWQSYLSLEPQLMIKRVNKLLQPPPTASL
HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEE
RIDHNGVLYAVGSAPRQWILATRKSWSVIPGLTQFQDQDLVESELNELAIYQSQIEREII
EECCCCEEEEECCCCCHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCEEE
FFPEGSQEIIPSELSKLNNLVLAIKKLLPIAKYLEKDVHIQIIGHTNTTGTESRNAQLSA
ECCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
GRSQRVLSYLSSQGISTSQLQVLGVSSSQPLQPELTDEGKKFNRRVSFKVIIMRVGSSK
CHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCEEEEEEEEEECCCCC
>Mature Secondary Structure
MNNDAIDSSSQISPGNDLSLINKITKVDDELSKLRSLLLGVEPAKLNQLYELLDNPHIRP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH
EDISRLLPEAVILRSQQDKQLIAAMISIVEEAIQVSVQQDENILSEAFFPVIIPASRKAI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH
ATLLDEMMQSLNQALEHSFSWESLQWRLEAKRTGKPFAEIVLLRTLVYRVEQIFLIHKNT
HHHHHHHHHHHHHHHHHCCCHHHHHEEEEHHCCCCHHHHHHHHHHHHHHHHHEEEEECCC
GLLLQHLVANQVTSQDPDLVVAMLTAIQDFIKDSFSVQKTDQLQSLRFGELRIWITEGPQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCH
ALLAATIRGNPPQELRLSLQTAIEKIHLKLSREMKDFAGDAKPFQVCQPYLESCLISQYK
HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FKSASKKSYKYAWTFLGIIAIACGIWSFLAVREQLRWRAYLQELDSQPGIVVTDTKQQFG
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHH
KYFISGLRDPLASDPHTLLQQTKLNPQTIVSHWQSYLSLEPQLMIKRVNKLLQPPPTASL
HHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEE
RIDHNGVLYAVGSAPRQWILATRKSWSVIPGLTQFQDQDLVESELNELAIYQSQIEREII
EECCCCEEEEECCCCCHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCEEE
FFPEGSQEIIPSELSKLNNLVLAIKKLLPIAKYLEKDVHIQIIGHTNTTGTESRNAQLSA
ECCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC
GRSQRVLSYLSSQGISTSQLQVLGVSSSQPLQPELTDEGKKFNRRVSFKVIIMRVGSSK
CHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA