| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230514
Identifier: 17230514
GI number: 17230514
Start: 3663957
End: 3664418
Strand: Reverse
Name: 17230514
Synonym: all3022
Alternate gene names: NA
Gene position: 3664418-3663957 (Counterclockwise)
Preceding gene: 17230515
Following gene: 17230513
Centisome position: 57.13
GC content: 44.16
Gene sequence:
>462_bases ATGCTGGATAGTATGTTTAAGAAACTGCCTTTTGCCTTGGTTGCAGCTACTGTTTTAGTGGTATCGATAGACCATCCCAG CACCACATTAGCCGGAACTTGTGCTTCTAAATGTGGCTCACGACCGCTACAGTTTACACCAGGGCAACGGATTCGCTTAG AAATTATCAATAAGACATCAAATTTAGTCGAACTAGAAAGAGTCCAAGGTGCGCCTCCCATTCACCTACAACCTCAACAA AAACTGCAATTTCCCCAACAGGAAGATTCCCAACCGAATCTTTCTCTGGTTTTTTGGGATGAAACGGGAGCGCCATTACA AGCTGTTGTTTCTAAACCAAACTTTGGCACTCTACGTGTAGAATTTCACCCTACTTGGCGTTACCCAGGCAATGGTCTCC AACCGACCGAAGGTCATCGCTCTCTCTATATACTCAATGATGGACGGATAAATGTATTTTGA
Upstream 100 bases:
>100_bases GTTGGATAGCACTCCACTAGGCTACTATTCTGCATAAGTATTGTCGCTGAACGCCGAAAATTTATTAAATTGACGCGGCG ATCGCCACCCAAAATTATTT
Downstream 100 bases:
>100_bases ACCGACATGATGATTGTGGAAGTAGCAATGGTCTTGAGAAGCATTTCCCTCTAAAGAAATGGGTCAAGCATTCACACTGA CTTTTGAAGTTAGTCAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MLDSMFKKLPFALVAATVLVVSIDHPSTTLAGTCASKCGSRPLQFTPGQRIRLEIINKTSNLVELERVQGAPPIHLQPQQ KLQFPQQEDSQPNLSLVFWDETGAPLQAVVSKPNFGTLRVEFHPTWRYPGNGLQPTEGHRSLYILNDGRINVF
Sequences:
>Translated_153_residues MLDSMFKKLPFALVAATVLVVSIDHPSTTLAGTCASKCGSRPLQFTPGQRIRLEIINKTSNLVELERVQGAPPIHLQPQQ KLQFPQQEDSQPNLSLVFWDETGAPLQAVVSKPNFGTLRVEFHPTWRYPGNGLQPTEGHRSLYILNDGRINVF >Mature_153_residues MLDSMFKKLPFALVAATVLVVSIDHPSTTLAGTCASKCGSRPLQFTPGQRIRLEIINKTSNLVELERVQGAPPIHLQPQQ KLQFPQQEDSQPNLSLVFWDETGAPLQAVVSKPNFGTLRVEFHPTWRYPGNGLQPTEGHRSLYILNDGRINVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17046; Mature: 17046
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDSMFKKLPFALVAATVLVVSIDHPSTTLAGTCASKCGSRPLQFTPGQRIRLEIINKTS CCHHHHHHCCHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEEECCCC NLVELERVQGAPPIHLQPQQKLQFPQQEDSQPNLSLVFWDETGAPLQAVVSKPNFGTLRV CEEEEHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCEEEE EFHPTWRYPGNGLQPTEGHRSLYILNDGRINVF EEEECCCCCCCCCCCCCCCCEEEEEECCEEEEC >Mature Secondary Structure MLDSMFKKLPFALVAATVLVVSIDHPSTTLAGTCASKCGSRPLQFTPGQRIRLEIINKTS CCHHHHHHCCHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEEECCCC NLVELERVQGAPPIHLQPQQKLQFPQQEDSQPNLSLVFWDETGAPLQAVVSKPNFGTLRV CEEEEHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCEEEE EFHPTWRYPGNGLQPTEGHRSLYILNDGRINVF EEEECCCCCCCCCCCCCCCCEEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA