| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230495
Identifier: 17230495
GI number: 17230495
Start: 3646956
End: 3647273
Strand: Direct
Name: 17230495
Synonym: alr3003
Alternate gene names: NA
Gene position: 3646956-3647273 (Clockwise)
Preceding gene: 17230494
Following gene: 17230496
Centisome position: 56.86
GC content: 36.48
Gene sequence:
>318_bases ATGACTAATACAAAACCTGTTCGTCTTCGTCAACTAGGGAGAATATTTCCAGAATTTACAATTCCACCGGAAGAATTAGC TAGACGGGAAGCTGAAAAAAATACTCGTGGACAAAAAGCGCGTGTTGTTTTTGATCAAGTTTTTCCACAATTAATAGATG AACATTACAACTGGTTTATTGTGATTGAACCAAACAGTGGTGATTATTTTATTGATACAGATGAAAATATGGCTGACAAA AAAGCACGCCAAAAATATCCTACTGGTTGGCTTGTTACTTTCCGTCTCAATGAAACAGGTACTTGTGGACGGATATGA
Upstream 100 bases:
>100_bases ATCGCACGAAAAATTTTGATACGCTACGATCAACACAAGTCGGCAATTACTGTTAATTTAAAAAGTAGCAATAATTTCCA AAAATGAGGTCAGATAAATT
Downstream 100 bases:
>100_bases TTTCAGGGAGGTTTGGTGAAATTGGGGAGCTAATTTTTGATATGGAGGTTATTTCCAGTGATGGAGATAGTTATCCTATT GAAGTTTTATTAGACACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTNTKPVRLRQLGRIFPEFTIPPEELARREAEKNTRGQKARVVFDQVFPQLIDEHYNWFIVIEPNSGDYFIDTDENMADK KARQKYPTGWLVTFRLNETGTCGRI
Sequences:
>Translated_105_residues MTNTKPVRLRQLGRIFPEFTIPPEELARREAEKNTRGQKARVVFDQVFPQLIDEHYNWFIVIEPNSGDYFIDTDENMADK KARQKYPTGWLVTFRLNETGTCGRI >Mature_104_residues TNTKPVRLRQLGRIFPEFTIPPEELARREAEKNTRGQKARVVFDQVFPQLIDEHYNWFIVIEPNSGDYFIDTDENMADKK ARQKYPTGWLVTFRLNETGTCGRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12362; Mature: 12231
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTKPVRLRQLGRIFPEFTIPPEELARREAEKNTRGQKARVVFDQVFPQLIDEHYNWFI CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEE VIEPNSGDYFIDTDENMADKKARQKYPTGWLVTFRLNETGTCGRI EEECCCCCEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure TNTKPVRLRQLGRIFPEFTIPPEELARREAEKNTRGQKARVVFDQVFPQLIDEHYNWFI CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEE VIEPNSGDYFIDTDENMADKKARQKYPTGWLVTFRLNETGTCGRI EEECCCCCEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA