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The map label for this gene is 17230471

Identifier: 17230471

GI number: 17230471

Start: 3620173

End: 3621135

Strand: Direct

Name: 17230471

Synonym: alr2979

Alternate gene names: NA

Gene position: 3620173-3621135 (Clockwise)

Preceding gene: 17230470

Following gene: 17230472

Centisome position: 56.44

GC content: 42.58

Gene sequence:

>963_bases
ATGTCACAGACTTCTCTCCCCACAGAATGGCTGAAACAACTCTCCGACCCCTATGCTGTGTTAGGGATTCCTGTGACTGC
TGATGAGAAGAAAATTCTCACCCGCTATCACGTTTTAGCAAAACTATTACATCCTGACCGCTACACTAACGACAATAGTC
TAGAGAAAGAATTAGCCACAGCAACCTTTACCTGTTTAGTTAACCCTGCTTACGAGCAATTGAAGAATAAGCACGAGCGT
CAGAGCATTTTAGAATCGCTGCGCTCAGAAGCGATCGCCTGGAAAAAGCAGTCCTTATATCTGCAAAGTGCCATAGCCAA
GCAAATGATGGCAATGTCTGCACGAGAAGCAGATTCATTTTATCAACAAGCGATCGCTGCCTGTGCTGAAGCCCAGTATA
AATCTCCGCGCAAGTCCCATCAAGTAACTAGACAAATAATTACCCTCAATCTAGCTTACTTATCCTTGCAAAAGTCCGAA
CCTTTAATTTTAGAAGTAAATCCACCTGTCAAATCCAAGAGAAACCCTCAACCAGTAGAACCCCAGGAAAGAGAGATCAC
ATCAGATGAGAAAGCTAGTGTCCAACCCGCAGTCATAAATTATGCTCCACGGCACTACCAGCGTGGCCTTCAGTATACAA
AACAGGGTCAATGGGCTAGTGCTGTGCAGGAACTACGGGACGCGATTAAGCTAGAACCGAGTAACAGCGATTATTATGCC
TTATTAGGCTTTGTTTATCTACGACAGAGTTTTGTGGGGATGGCAAAAGTTTATATGCGCCAAGCATTAAAACTAAATCC
GCAGCAGGAACTAGCTTTAAAATATGCTCAATATTTAAAAATTGACTGTATTGATAATCTTGATCCACCATCACTGGCTA
AAGCTTTAGGCATTGCTGCTGTATTGAGCAAATTTGTTACCAAATTAGAAGCTAACATCAGTCAAGTGTTGAAATCTCGG
TAA

Upstream 100 bases:

>100_bases
TTAAACCCTACGTAAATATTAATCCCTAATCCCAGTCCCCAGTCCCCAATCGCCACTTCTCGATGCTATCTTAAAGTTTT
CATCTGCAAATCCTAATCAA

Downstream 100 bases:

>100_bases
AAAACCGTACTGAGACCGAAGTTTATTTATAAGATGAATCCCCTAGACTAGAATGAAAATAGAGGCAAAACTATAAGCTG
CTGAGTGATATTACTCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; DNAJ Domain-Containing Protein; DNAJ-Like Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSQTSLPTEWLKQLSDPYAVLGIPVTADEKKILTRYHVLAKLLHPDRYTNDNSLEKELATATFTCLVNPAYEQLKNKHER
QSILESLRSEAIAWKKQSLYLQSAIAKQMMAMSAREADSFYQQAIAACAEAQYKSPRKSHQVTRQIITLNLAYLSLQKSE
PLILEVNPPVKSKRNPQPVEPQEREITSDEKASVQPAVINYAPRHYQRGLQYTKQGQWASAVQELRDAIKLEPSNSDYYA
LLGFVYLRQSFVGMAKVYMRQALKLNPQQELALKYAQYLKIDCIDNLDPPSLAKALGIAAVLSKFVTKLEANISQVLKSR

Sequences:

>Translated_320_residues
MSQTSLPTEWLKQLSDPYAVLGIPVTADEKKILTRYHVLAKLLHPDRYTNDNSLEKELATATFTCLVNPAYEQLKNKHER
QSILESLRSEAIAWKKQSLYLQSAIAKQMMAMSAREADSFYQQAIAACAEAQYKSPRKSHQVTRQIITLNLAYLSLQKSE
PLILEVNPPVKSKRNPQPVEPQEREITSDEKASVQPAVINYAPRHYQRGLQYTKQGQWASAVQELRDAIKLEPSNSDYYA
LLGFVYLRQSFVGMAKVYMRQALKLNPQQELALKYAQYLKIDCIDNLDPPSLAKALGIAAVLSKFVTKLEANISQVLKSR
>Mature_319_residues
SQTSLPTEWLKQLSDPYAVLGIPVTADEKKILTRYHVLAKLLHPDRYTNDNSLEKELATATFTCLVNPAYEQLKNKHERQ
SILESLRSEAIAWKKQSLYLQSAIAKQMMAMSAREADSFYQQAIAACAEAQYKSPRKSHQVTRQIITLNLAYLSLQKSEP
LILEVNPPVKSKRNPQPVEPQEREITSDEKASVQPAVINYAPRHYQRGLQYTKQGQWASAVQELRDAIKLEPSNSDYYAL
LGFVYLRQSFVGMAKVYMRQALKLNPQQELALKYAQYLKIDCIDNLDPPSLAKALGIAAVLSKFVTKLEANISQVLKSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36287; Mature: 36156

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTSLPTEWLKQLSDPYAVLGIPVTADEKKILTRYHVLAKLLHPDRYTNDNSLEKELAT
CCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ATFTCLVNPAYEQLKNKHERQSILESLRSEAIAWKKQSLYLQSAIAKQMMAMSAREADSF
HHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQQAIAACAEAQYKSPRKSHQVTRQIITLNLAYLSLQKSEPLILEVNPPVKSKRNPQPVE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCC
PQEREITSDEKASVQPAVINYAPRHYQRGLQYTKQGQWASAVQELRDAIKLEPSNSDYYA
CCHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHH
LLGFVYLRQSFVGMAKVYMRQALKLNPQQELALKYAQYLKIDCIDNLDPPSLAKALGIAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VLSKFVTKLEANISQVLKSR
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQTSLPTEWLKQLSDPYAVLGIPVTADEKKILTRYHVLAKLLHPDRYTNDNSLEKELAT
CCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ATFTCLVNPAYEQLKNKHERQSILESLRSEAIAWKKQSLYLQSAIAKQMMAMSAREADSF
HHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQQAIAACAEAQYKSPRKSHQVTRQIITLNLAYLSLQKSEPLILEVNPPVKSKRNPQPVE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCC
PQEREITSDEKASVQPAVINYAPRHYQRGLQYTKQGQWASAVQELRDAIKLEPSNSDYYA
CCHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHH
LLGFVYLRQSFVGMAKVYMRQALKLNPQQELALKYAQYLKIDCIDNLDPPSLAKALGIAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VLSKFVTKLEANISQVLKSR
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA