| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230468
Identifier: 17230468
GI number: 17230468
Start: 3618826
End: 3619359
Strand: Reverse
Name: 17230468
Synonym: all2976
Alternate gene names: NA
Gene position: 3619359-3618826 (Counterclockwise)
Preceding gene: 17230469
Following gene: 17230463
Centisome position: 56.43
GC content: 41.57
Gene sequence:
>534_bases ATGACTAAATGGCTTCCTTGGAATTCTAAGTTACAAAAACTTCGTGCCAAGCTGCTCAATGACCCATACTATCGACTACA GTCTGGGGAGGAGATTCAGATTGCAGCAGAATTAGGAATTCGTATTGATACTAATCAAGCAACTGTTGATGATTGGTTAC GGCTACCAGGTTTGTCAATTCACCAAGCGCGATCGCTAGTGGAACTTTCTCGTTCTGGTGTTAAATTTTACTGTATTGAA GATATTGCTGCGGCTTTGGGGCTACCAGCACAAAGGCTAGAACCGTTAAAGCCTTTATTGACTTTTAGTTATTATGACCA CGAATCAATAGTTGGTTTTACGCAATTAGTTAATCCTAATACCGCCTCAGTTGAACAGTTAGCCCAAATACCATACATGG ATATGTCTTTAGCCCAGGCTGTGGTAGACAATCGAGTGTCGGCTGGAGCTTATCGTAACTTAGCTGATTTCCAACGCAGA TTGCAACTTCCTGGTGAAGCGATCGCCCAGTTAATGTATTTTCTAAGGTTTTAA
Upstream 100 bases:
>100_bases CCGTCAGTTGCTAGATCAGATTTCTTGATGGGGATTGGGAATTGGGGATTGGGGAAGAATGACAACTGACAATTGACAAC TGACAACTGACAACTAGCTA
Downstream 100 bases:
>100_bases TTATGATAACTGTGGTAATTGGTAATTGGTAATGGTAAAAACAATTGCTTAATAGCTATTACCTATTACCAATCAAACCC GCCAGATTGTTAGAGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSIHQARSLVELSRSGVKFYCIE DIAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPNTASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRR LQLPGEAIAQLMYFLRF
Sequences:
>Translated_177_residues MTKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSIHQARSLVELSRSGVKFYCIE DIAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPNTASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRR LQLPGEAIAQLMYFLRF >Mature_176_residues TKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSIHQARSLVELSRSGVKFYCIED IAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPNTASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRRL QLPGEAIAQLMYFLRF
Specific function: Unknown
COG id: COG1555
COG function: function code L; DNA uptake protein and related DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20113; Mature: 19982
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSI CCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECEEEECCCCCHHHHHHCCCCCH HQARSLVELSRSGVKFYCIEDIAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPN HHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC TASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRRLQLPGEAIAQLMYFLRF HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC >Mature Secondary Structure TKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSI CCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECEEEECCCCCHHHHHHCCCCCH HQARSLVELSRSGVKFYCIEDIAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPN HHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC TASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRRLQLPGEAIAQLMYFLRF HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA