Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

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The map label for this gene is 17230468

Identifier: 17230468

GI number: 17230468

Start: 3618826

End: 3619359

Strand: Reverse

Name: 17230468

Synonym: all2976

Alternate gene names: NA

Gene position: 3619359-3618826 (Counterclockwise)

Preceding gene: 17230469

Following gene: 17230463

Centisome position: 56.43

GC content: 41.57

Gene sequence:

>534_bases
ATGACTAAATGGCTTCCTTGGAATTCTAAGTTACAAAAACTTCGTGCCAAGCTGCTCAATGACCCATACTATCGACTACA
GTCTGGGGAGGAGATTCAGATTGCAGCAGAATTAGGAATTCGTATTGATACTAATCAAGCAACTGTTGATGATTGGTTAC
GGCTACCAGGTTTGTCAATTCACCAAGCGCGATCGCTAGTGGAACTTTCTCGTTCTGGTGTTAAATTTTACTGTATTGAA
GATATTGCTGCGGCTTTGGGGCTACCAGCACAAAGGCTAGAACCGTTAAAGCCTTTATTGACTTTTAGTTATTATGACCA
CGAATCAATAGTTGGTTTTACGCAATTAGTTAATCCTAATACCGCCTCAGTTGAACAGTTAGCCCAAATACCATACATGG
ATATGTCTTTAGCCCAGGCTGTGGTAGACAATCGAGTGTCGGCTGGAGCTTATCGTAACTTAGCTGATTTCCAACGCAGA
TTGCAACTTCCTGGTGAAGCGATCGCCCAGTTAATGTATTTTCTAAGGTTTTAA

Upstream 100 bases:

>100_bases
CCGTCAGTTGCTAGATCAGATTTCTTGATGGGGATTGGGAATTGGGGATTGGGGAAGAATGACAACTGACAATTGACAAC
TGACAACTGACAACTAGCTA

Downstream 100 bases:

>100_bases
TTATGATAACTGTGGTAATTGGTAATTGGTAATGGTAAAAACAATTGCTTAATAGCTATTACCTATTACCAATCAAACCC
GCCAGATTGTTAGAGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSIHQARSLVELSRSGVKFYCIE
DIAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPNTASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRR
LQLPGEAIAQLMYFLRF

Sequences:

>Translated_177_residues
MTKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSIHQARSLVELSRSGVKFYCIE
DIAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPNTASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRR
LQLPGEAIAQLMYFLRF
>Mature_176_residues
TKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSIHQARSLVELSRSGVKFYCIED
IAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPNTASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRRL
QLPGEAIAQLMYFLRF

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20113; Mature: 19982

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSI
CCCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECEEEECCCCCHHHHHHCCCCCH
HQARSLVELSRSGVKFYCIEDIAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPN
HHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
TASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRRLQLPGEAIAQLMYFLRF
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
TKWLPWNSKLQKLRAKLLNDPYYRLQSGEEIQIAAELGIRIDTNQATVDDWLRLPGLSI
CCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECEEEECCCCCHHHHHHCCCCCH
HQARSLVELSRSGVKFYCIEDIAAALGLPAQRLEPLKPLLTFSYYDHESIVGFTQLVNPN
HHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
TASVEQLAQIPYMDMSLAQAVVDNRVSAGAYRNLADFQRRLQLPGEAIAQLMYFLRF
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA