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The map label for this gene is 17230454

Identifier: 17230454

GI number: 17230454

Start: 3602990

End: 3603298

Strand: Reverse

Name: 17230454

Synonym: all2962

Alternate gene names: NA

Gene position: 3603298-3602990 (Counterclockwise)

Preceding gene: 17230455

Following gene: 17230453

Centisome position: 56.18

GC content: 35.28

Gene sequence:

>309_bases
ATGTTGAATGAGGCTCTAAGGTTGATGAGGGTATTCCATGATTTATCTCAAAAGGAGATGGCAGAGAGACTAGGAATATC
CAAGTCGTATCTTTCGGAAATTGAATCAGGTAAAAAAATTCCCACCCTTGATTTACTTAATCGTTATTCTGGTTTATTTG
ATATACCCGTATCCTCAATTATGTTCTTTTCGGAAAACTTAGACAAGGATGTAAAAACGGAAAAATTGAGGAATTTTGTA
TCTTCTAAGATTATTGCAATCCTCAACTTTATTGCTGAAAGGTCTGGTAATGCCTGTGCTGAGGATTAA

Upstream 100 bases:

>100_bases
TTTCAAAATTTTGAAGTGGTTGATCGATTTGTGGCAAGACTAGACTGTTAACTCTTTTATATAACTCTATTACAGACCCT
CTAGCCAAAGAAGACTAAAT

Downstream 100 bases:

>100_bases
AAAAATAGGTTATAAACTAGACCAATCACCTTTCTATTGTTTGCAATCTAAAGCAAAACTTGCAACTTTATTAGGCGTAA
GCCGCAGTAGGCTCATACAA

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Hypotethical Transcriptional Regulator; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MLNEALRLMRVFHDLSQKEMAERLGISKSYLSEIESGKKIPTLDLLNRYSGLFDIPVSSIMFFSENLDKDVKTEKLRNFV
SSKIIAILNFIAERSGNACAED

Sequences:

>Translated_102_residues
MLNEALRLMRVFHDLSQKEMAERLGISKSYLSEIESGKKIPTLDLLNRYSGLFDIPVSSIMFFSENLDKDVKTEKLRNFV
SSKIIAILNFIAERSGNACAED
>Mature_102_residues
MLNEALRLMRVFHDLSQKEMAERLGISKSYLSEIESGKKIPTLDLLNRYSGLFDIPVSSIMFFSENLDKDVKTEKLRNFV
SSKIIAILNFIAERSGNACAED

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11603; Mature: 11603

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEALRLMRVFHDLSQKEMAERLGISKSYLSEIESGKKIPTLDLLNRYSGLFDIPVSSI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
MFFSENLDKDVKTEKLRNFVSSKIIAILNFIAERSGNACAED
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLNEALRLMRVFHDLSQKEMAERLGISKSYLSEIESGKKIPTLDLLNRYSGLFDIPVSSI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
MFFSENLDKDVKTEKLRNFVSSKIIAILNFIAERSGNACAED
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA