Click here to switch to the map view.

The map label for this gene is 17230442

Identifier: 17230442

GI number: 17230442

Start: 3589526

End: 3590740

Strand: Reverse

Name: 17230442

Synonym: all2950

Alternate gene names: NA

Gene position: 3590740-3589526 (Counterclockwise)

Preceding gene: 17230443

Following gene: 17230434

Centisome position: 55.98

GC content: 38.77

Gene sequence:

>1215_bases
ATGCTACCAACGGAACTCCTCAGCCATCGCCTAAACGGCGAAGAAATAATACCAAAAAGACTGAAGATTGATCAGAAAAC
CATAGATTTAACTAATGAATTAATCAGTTGTTTTCAAGCAGCACAAGGTAAGACTCAAGGCTTTTTAGAAAATCAACTTT
TGGATTTAGAAGGAGACGCTACAGATTATCGTGTAAAACGGGGTTTAGCTTACATTATCAAAAGCAATTTCTGCACCTTT
GAAGTAGTGAGTCCTCTAGAACCACCAATGTTAAGAGAACGGGTATTTTCTTTGGCTGCGAAATCTGCACCTAGTCGGGA
ATCAACACAACTGACATTGAGCAAGATTGCTGATGAATTAACTCAAGAATTAGAACGGGAAGTTTTATCAGAACAAGTCC
GTGATGGACTTTATGCTGATTTGTCTGAAAATAAAATTTTGACAAACTTTGATGTCCCCACACCAGTAGATATATTAAAT
CGCTATAACTTGTCCCAGGTGCAGGGAATATTCTATAAAGCCAGCAAGTTAATTTTAAATGCTCATCGCAATGTTCCAGG
GGAATATAAACTGTTATTCCGCTATCTGAAGCTATTTCAACTCATGGCTTATATTGAAGGCGATGCTGACCACGGCTTTA
CAATCACCGTTGATGGGCCGACCAGCTTATTTAATTCTAGTACACGCTATGGGTTAGCGATCGCCAAACTCATCCCCGCC
TTACTTCATGTCACCAAATGGAGTCTAGCAGCCACATTACAAACCCGTGATGTCTACACAGATACATGGAAAACAGGCAG
ATTTACCCTTAATTCCGAGTGTGGTTTAGTCTCTCATTACTCCAAAGGGAAACCCTACGATAGTATGTTAGAAGCATCCT
TTGCTGATAAATGGGATGCTTTAAAAACAGCATGGGTATTAGAAAGAGAAGTAGATTTAATTCCCATTCCTGGGAGTGTG
ATGATTCCCGACTTTCGCTTAGTTCATCCTGATGGGAGAGAATTTTTATTAGAAATAGTTGGTTATTGGCGACCAGAATA
TTTACAAAAGAAGTTTTCCCAAGTGCGGCGTTCTGGTTGTGATAATTTAATCTTGGCTATTTCCGAAAGATTGAATTTGG
AAAAAGCTGGAGTTAAGTTGGATAATGTGCCGGCAAAAATCATTTGGTTTAAAGATAAATTATTGCCAAAATCTGTTTTA
GCTGTGTTGGATTAA

Upstream 100 bases:

>100_bases
CAAGTAGTTTATGGCAGTGGTAAGGGAACAACCGCTAAAGCTGCCGAGCAAATAGAAATCAATTATGTAGTCGATAATTC
ATCAGCTAACAACCAGGGAA

Downstream 100 bases:

>100_bases
ACTATCAAGTAAGCTATTCTGCTTTTAAGTTGCACAATCCATTGTGAGGACAGTTGACAGTTGACAGTTAACAGCGATTA
TTAGTAGTTATGCAATTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLPTELLSHRLNGEEIIPKRLKIDQKTIDLTNELISCFQAAQGKTQGFLENQLLDLEGDATDYRVKRGLAYIIKSNFCTF
EVVSPLEPPMLRERVFSLAAKSAPSRESTQLTLSKIADELTQELEREVLSEQVRDGLYADLSENKILTNFDVPTPVDILN
RYNLSQVQGIFYKASKLILNAHRNVPGEYKLLFRYLKLFQLMAYIEGDADHGFTITVDGPTSLFNSSTRYGLAIAKLIPA
LLHVTKWSLAATLQTRDVYTDTWKTGRFTLNSECGLVSHYSKGKPYDSMLEASFADKWDALKTAWVLEREVDLIPIPGSV
MIPDFRLVHPDGREFLLEIVGYWRPEYLQKKFSQVRRSGCDNLILAISERLNLEKAGVKLDNVPAKIIWFKDKLLPKSVL
AVLD

Sequences:

>Translated_404_residues
MLPTELLSHRLNGEEIIPKRLKIDQKTIDLTNELISCFQAAQGKTQGFLENQLLDLEGDATDYRVKRGLAYIIKSNFCTF
EVVSPLEPPMLRERVFSLAAKSAPSRESTQLTLSKIADELTQELEREVLSEQVRDGLYADLSENKILTNFDVPTPVDILN
RYNLSQVQGIFYKASKLILNAHRNVPGEYKLLFRYLKLFQLMAYIEGDADHGFTITVDGPTSLFNSSTRYGLAIAKLIPA
LLHVTKWSLAATLQTRDVYTDTWKTGRFTLNSECGLVSHYSKGKPYDSMLEASFADKWDALKTAWVLEREVDLIPIPGSV
MIPDFRLVHPDGREFLLEIVGYWRPEYLQKKFSQVRRSGCDNLILAISERLNLEKAGVKLDNVPAKIIWFKDKLLPKSVL
AVLD
>Mature_404_residues
MLPTELLSHRLNGEEIIPKRLKIDQKTIDLTNELISCFQAAQGKTQGFLENQLLDLEGDATDYRVKRGLAYIIKSNFCTF
EVVSPLEPPMLRERVFSLAAKSAPSRESTQLTLSKIADELTQELEREVLSEQVRDGLYADLSENKILTNFDVPTPVDILN
RYNLSQVQGIFYKASKLILNAHRNVPGEYKLLFRYLKLFQLMAYIEGDADHGFTITVDGPTSLFNSSTRYGLAIAKLIPA
LLHVTKWSLAATLQTRDVYTDTWKTGRFTLNSECGLVSHYSKGKPYDSMLEASFADKWDALKTAWVLEREVDLIPIPGSV
MIPDFRLVHPDGREFLLEIVGYWRPEYLQKKFSQVRRSGCDNLILAISERLNLEKAGVKLDNVPAKIIWFKDKLLPKSVL
AVLD

Specific function: Unknown

COG id: COG3372

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45876; Mature: 45876

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTELLSHRLNGEEIIPKRLKIDQKTIDLTNELISCFQAAQGKTQGFLENQLLDLEGDA
CCCHHHHHHCCCCCHHCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC
TDYRVKRGLAYIIKSNFCTFEVVSPLEPPMLRERVFSLAAKSAPSRESTQLTLSKIADEL
HHHHHHHHHHEEHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
TQELEREVLSEQVRDGLYADLSENKILTNFDVPTPVDILNRYNLSQVQGIFYKASKLILN
HHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
AHRNVPGEYKLLFRYLKLFQLMAYIEGDADHGFTITVDGPTSLFNSSTRYGLAIAKLIPA
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHH
LLHVTKWSLAATLQTRDVYTDTWKTGRFTLNSECGLVSHYSKGKPYDSMLEASFADKWDA
HHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHH
LKTAWVLEREVDLIPIPGSVMIPDFRLVHPDGREFLLEIVGYWRPEYLQKKFSQVRRSGC
HHHHHHHHCCCCEEECCCCEECCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
DNLILAISERLNLEKAGVKLDNVPAKIIWFKDKLLPKSVLAVLD
CHHHHHHHHHCCHHHCCCEECCCCEEEEEEECCCCHHHHHHHCC
>Mature Secondary Structure
MLPTELLSHRLNGEEIIPKRLKIDQKTIDLTNELISCFQAAQGKTQGFLENQLLDLEGDA
CCCHHHHHHCCCCCHHCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC
TDYRVKRGLAYIIKSNFCTFEVVSPLEPPMLRERVFSLAAKSAPSRESTQLTLSKIADEL
HHHHHHHHHHEEHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
TQELEREVLSEQVRDGLYADLSENKILTNFDVPTPVDILNRYNLSQVQGIFYKASKLILN
HHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH
AHRNVPGEYKLLFRYLKLFQLMAYIEGDADHGFTITVDGPTSLFNSSTRYGLAIAKLIPA
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHH
LLHVTKWSLAATLQTRDVYTDTWKTGRFTLNSECGLVSHYSKGKPYDSMLEASFADKWDA
HHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHH
LKTAWVLEREVDLIPIPGSVMIPDFRLVHPDGREFLLEIVGYWRPEYLQKKFSQVRRSGC
HHHHHHHHCCCCEEECCCCEECCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
DNLILAISERLNLEKAGVKLDNVPAKIIWFKDKLLPKSVLAVLD
CHHHHHHHHHCCHHHCCCEECCCCEEEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA