| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230397
Identifier: 17230397
GI number: 17230397
Start: 3545757
End: 3546326
Strand: Reverse
Name: 17230397
Synonym: all2905
Alternate gene names: NA
Gene position: 3546326-3545757 (Counterclockwise)
Preceding gene: 17230398
Following gene: 17230396
Centisome position: 55.29
GC content: 36.84
Gene sequence:
>570_bases ATGTCGTTATCAACTCCAGTATTCGCCAACAAGACACTAGAGGAGTTTCTGAAATTACCAGAAACTAAACCCGCCAGTGA ATATATTGACGGTAAAATCAACCAAAAACTGACGCCTCAAGGAGAACATAGCACCTTACAAAGTAGTTTGGTGACAGCTA TTAATGAGATTGCTAAACCACAAAAATTAGCTTACGCATTTCCTGAGTTACGCTGCACGTTTTCGGGAAATTCTATAGTT CCAGATATTGCTGTCTTTGAATGGTCACGTATTCCTTTACGTCCTAATGGCAGAATTGCCAATCAATTTGAAATTTCCCT CGATTGGATTATTGAAATTCTTTCTCCAGAACAATCCCCTAATCGGGTTATCCGTAAAATAATGTTTTCTATGCAAAATG GTGCAAAGCTAGGTTGGTTTCTCGACCCTAATGATGAATCTATCGTGGTTTTTCAACCTGATATATTACCAGAAATCAAA GCAGGGAAAGATATTTTACCTGTTATGAGTGTATTGGCGAATTGGCAATTAACTGTAGAAGATATTTTTAGTTGTTTGAA TTTTAGTTGA
Upstream 100 bases:
>100_bases ATTCACAACTTTGAATTTCCCCTTTTCTGTAATCTAACATTGCATAATTTGAATAATAGTCAATATTTCTTTGCTGGGAT TGTTTTAGGAGTAATTGCTG
Downstream 100 bases:
>100_bases AAAAACAAATAATACATATTTTGTAGGGGTTTACGGCGTAAACTCTTCTTTTTAAATCTTTATGAATGTATCAAAATCGC ATATCTTATGGGTACAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSLSTPVFANKTLEEFLKLPETKPASEYIDGKINQKLTPQGEHSTLQSSLVTAINEIAKPQKLAYAFPELRCTFSGNSIV PDIAVFEWSRIPLRPNGRIANQFEISLDWIIEILSPEQSPNRVIRKIMFSMQNGAKLGWFLDPNDESIVVFQPDILPEIK AGKDILPVMSVLANWQLTVEDIFSCLNFS
Sequences:
>Translated_189_residues MSLSTPVFANKTLEEFLKLPETKPASEYIDGKINQKLTPQGEHSTLQSSLVTAINEIAKPQKLAYAFPELRCTFSGNSIV PDIAVFEWSRIPLRPNGRIANQFEISLDWIIEILSPEQSPNRVIRKIMFSMQNGAKLGWFLDPNDESIVVFQPDILPEIK AGKDILPVMSVLANWQLTVEDIFSCLNFS >Mature_188_residues SLSTPVFANKTLEEFLKLPETKPASEYIDGKINQKLTPQGEHSTLQSSLVTAINEIAKPQKLAYAFPELRCTFSGNSIVP DIAVFEWSRIPLRPNGRIANQFEISLDWIIEILSPEQSPNRVIRKIMFSMQNGAKLGWFLDPNDESIVVFQPDILPEIKA GKDILPVMSVLANWQLTVEDIFSCLNFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21279; Mature: 21148
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSTPVFANKTLEEFLKLPETKPASEYIDGKINQKLTPQGEHSTLQSSLVTAINEIAKP CCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH QKLAYAFPELRCTFSGNSIVPDIAVFEWSRIPLRPNGRIANQFEISLDWIIEILSPEQSP HHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCH NRVIRKIMFSMQNGAKLGWFLDPNDESIVVFQPDILPEIKAGKDILPVMSVLANWQLTVE HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEHH DIFSCLNFS HHHHHHCCC >Mature Secondary Structure SLSTPVFANKTLEEFLKLPETKPASEYIDGKINQKLTPQGEHSTLQSSLVTAINEIAKP CCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH QKLAYAFPELRCTFSGNSIVPDIAVFEWSRIPLRPNGRIANQFEISLDWIIEILSPEQSP HHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCH NRVIRKIMFSMQNGAKLGWFLDPNDESIVVFQPDILPEIKAGKDILPVMSVLANWQLTVE HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEHH DIFSCLNFS HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA