| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230341
Identifier: 17230341
GI number: 17230341
Start: 3470430
End: 3471023
Strand: Reverse
Name: 17230341
Synonym: all2849
Alternate gene names: NA
Gene position: 3471023-3470430 (Counterclockwise)
Preceding gene: 17230342
Following gene: 17230340
Centisome position: 54.12
GC content: 40.07
Gene sequence:
>594_bases ATGCCAAACAACGTATTGCGCCAGTTAGTCTGGATTGATTACCGACTAGCAGTGTTATTTCTGATGATTGTGCCGATAGT TCTGTTAATTTGGGCTTATGCTCAACAAGCAGAAGCAATACAAAAGCTATTAATGATTTATTGGCGAGTTTCTAGCCTAC TAGCCATCACCATCTACTTAATGATTGCCCAATATCCAGTTAGTTTTATCTCTGGGTTAATAGGACAAATCCTCATTCCG ATTTCCCTGTGGTTTTGGGTGGACATCAACGATGAAATTGAGTATCAACCCAGTGGAGTGTTAAAACTCGCTTTTACTTC TTGGCGCTGGGCTGTCACCGTTTATTCTCTTATAGGAACTATAGCCTTCGTACCTTTTTTGGGTTGTGCTTTTTCTAGCA ATGTTGGACAAAATCCCACTTGCAGTGTCTGGTTAGAAGCTCCCTTACTGTTTAAAGATTATTTTCATCACAATAGTAAA CCCGGTTTCTTAGGCTTCTTAGGTATAGTTTGTCTAGTTATTTATGTATTATATTTAAGCTACTTTGTCGTCGTAAAGCT GGGCAAGCAGGGACGCTCGGCTACACCACAGTAA
Upstream 100 bases:
>100_bases CTCGGACATGGTGACAACAAAATCATCAAAAGTATTTCTAACTTAAAATATCCTTCACTCCTTATTCCTAGTCCCTATTC TTAAAAACTGACAATTAACT
Downstream 100 bases:
>100_bases ACTCTCACTGCGCTTCAGTTCTAAATTTCCAGCTTTCAAAATGAATTCTATTGGCAAGCGGCTAGAACAATACACCACCA AACGTCCACAAGAGGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPNNVLRQLVWIDYRLAVLFLMIVPIVLLIWAYAQQAEAIQKLLMIYWRVSSLLAITIYLMIAQYPVSFISGLIGQILIP ISLWFWVDINDEIEYQPSGVLKLAFTSWRWAVTVYSLIGTIAFVPFLGCAFSSNVGQNPTCSVWLEAPLLFKDYFHHNSK PGFLGFLGIVCLVIYVLYLSYFVVVKLGKQGRSATPQ
Sequences:
>Translated_197_residues MPNNVLRQLVWIDYRLAVLFLMIVPIVLLIWAYAQQAEAIQKLLMIYWRVSSLLAITIYLMIAQYPVSFISGLIGQILIP ISLWFWVDINDEIEYQPSGVLKLAFTSWRWAVTVYSLIGTIAFVPFLGCAFSSNVGQNPTCSVWLEAPLLFKDYFHHNSK PGFLGFLGIVCLVIYVLYLSYFVVVKLGKQGRSATPQ >Mature_196_residues PNNVLRQLVWIDYRLAVLFLMIVPIVLLIWAYAQQAEAIQKLLMIYWRVSSLLAITIYLMIAQYPVSFISGLIGQILIPI SLWFWVDINDEIEYQPSGVLKLAFTSWRWAVTVYSLIGTIAFVPFLGCAFSSNVGQNPTCSVWLEAPLLFKDYFHHNSKP GFLGFLGIVCLVIYVLYLSYFVVVKLGKQGRSATPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22433; Mature: 22302
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNNVLRQLVWIDYRLAVLFLMIVPIVLLIWAYAQQAEAIQKLLMIYWRVSSLLAITIYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIAQYPVSFISGLIGQILIPISLWFWVDINDEIEYQPSGVLKLAFTSWRWAVTVYSLIGT HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH IAFVPFLGCAFSSNVGQNPTCSVWLEAPLLFKDYFHHNSKPGFLGFLGIVCLVIYVLYLS HHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH YFVVVKLGKQGRSATPQ HHHHHHHCCCCCCCCCC >Mature Secondary Structure PNNVLRQLVWIDYRLAVLFLMIVPIVLLIWAYAQQAEAIQKLLMIYWRVSSLLAITIYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIAQYPVSFISGLIGQILIPISLWFWVDINDEIEYQPSGVLKLAFTSWRWAVTVYSLIGT HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH IAFVPFLGCAFSSNVGQNPTCSVWLEAPLLFKDYFHHNSKPGFLGFLGIVCLVIYVLYLS HHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH YFVVVKLGKQGRSATPQ HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA