| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17230307
Identifier: 17230307
GI number: 17230307
Start: 3424394
End: 3424615
Strand: Direct
Name: 17230307
Synonym: asr2815
Alternate gene names: NA
Gene position: 3424394-3424615 (Clockwise)
Preceding gene: 17230306
Following gene: 17230308
Centisome position: 53.39
GC content: 40.09
Gene sequence:
>222_bases ATGAGCCATGAAAATAAGTATTCTTCCTGTATTTGGTTTCGTCTCATCCGCAATACCTATCCTTGGTTATCATTACTCAT ACAAACTAGGCGAGTAATATTTTCCTACGGTAATCATCAGATACGGGAACAAGTTCGTTTTTGGCAGCTTTTTTATCGGT TGGACTTTGCCAGTCTCCTAGCGATCGCTATAGAATTAACCCAGCCAGAATATTGGGCGTAA
Upstream 100 bases:
>100_bases GCGAGTTTCACAGCCAAACAGGAAAGATGTCTTTTTCCTACACCCTTATACCCTTAAACCCCTACATCCCTTTCAAATCA GGAGGAAAGAAGTTTAGGAT
Downstream 100 bases:
>100_bases AAACATCACGTAAACCTTTGAGTTCCCAATCCCCAAACACTTGAGAAAAATTACACATCGAGTTAAGCTTCCTTAGCGTA ACTGCATACTTGTAACACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MSHENKYSSCIWFRLIRNTYPWLSLLIQTRRVIFSYGNHQIREQVRFWQLFYRLDFASLLAIAIELTQPEYWA
Sequences:
>Translated_73_residues MSHENKYSSCIWFRLIRNTYPWLSLLIQTRRVIFSYGNHQIREQVRFWQLFYRLDFASLLAIAIELTQPEYWA >Mature_72_residues SHENKYSSCIWFRLIRNTYPWLSLLIQTRRVIFSYGNHQIREQVRFWQLFYRLDFASLLAIAIELTQPEYWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9030; Mature: 8898
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHENKYSSCIWFRLIRNTYPWLSLLIQTRRVIFSYGNHQIREQVRFWQLFYRLDFASLL CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AIAIELTQPEYWA HHHHHCCCCCCCC >Mature Secondary Structure SHENKYSSCIWFRLIRNTYPWLSLLIQTRRVIFSYGNHQIREQVRFWQLFYRLDFASLL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH AIAIELTQPEYWA HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA