| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is minD [C]
Identifier: 17230289
GI number: 17230289
Start: 3401012
End: 3401761
Strand: Reverse
Name: minD [C]
Synonym: all2797
Alternate gene names: 17230289
Gene position: 3401761-3401012 (Counterclockwise)
Preceding gene: 17230290
Following gene: 17230288
Centisome position: 53.04
GC content: 37.33
Gene sequence:
>750_bases ATGTCTAAAATTATTGCGATTCACTCCTTTCGAGGTGGAACAGGTAAATCTAACTTAACAGCGAATTTAGCAGTCGCAAT GGCACTTCAAGAAAAGCGAGTGGCAATTGTAGATACTGATTTACAATCTCCGGGCATTCATGCTCTATTTGGTATTGATA AGACAATTACAGGCAAAACCTTAAATGACTATTTGTGGAATCGTAGTTGTATTGAGGATACCGCCTGTGATGTTACTTCT CATCTAGCAATTTCTCAGGGAACAGTTTTCCTCATACCCTCTAGTATCAATGCTGATGAAATTGCCAAAATTTTGAGCGA AGGATACAACGTTAGTTTACTAAATACTGGCTTTCAAAGATTAATTAAAGAATTAAAATTAGACTACTTATTTATTGATA CTCACCCTGGATTAAGCCGAGAAACTTTACTATGTATCGCTATTTCTGACTTGTTAATTATTATCCTGCGTCCAGATCGC CAAGACTTTCAAGGCACGGCAGTAACCGTGAATATTGCTCGTCAACTGCAAGTCCGCGAGATGATGATGGTCATTAATAA GATACCAAATCGCATGAATTTTGCATCACTACAGCAAAAAGTAGAGAAAACTTATAACGTTCCAGTTGCAGGTATATTGC CACTTTCGGAAGATATGGCACAACTGGGCAGTAGTGGCATATTTTGTTTACAATATCCTGACCATCCATTCACTCAAACC CTACAAAAATTAGCAGATAAAGTAAGTTAA
Upstream 100 bases:
>100_bases GCAGAAATAACTCAAACAGAATATTTTCAACAATTGCAGATAGAAGTTAAATATCTTCGCAATAGCAAGATATCTTAATC CCAATACGAATTAGTATTCT
Downstream 100 bases:
>100_bases GAAATCCGAAGCTATCTATTAATTAAAAAATAAAATAAATTTATAAACATTAAAGAAAATGACGGAAATAATTCAAGAAA TAGCAATCACATTTGAAGCA
Product: cell division inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSKIIAIHSFRGGTGKSNLTANLAVAMALQEKRVAIVDTDLQSPGIHALFGIDKTITGKTLNDYLWNRSCIEDTACDVTS HLAISQGTVFLIPSSINADEIAKILSEGYNVSLLNTGFQRLIKELKLDYLFIDTHPGLSRETLLCIAISDLLIIILRPDR QDFQGTAVTVNIARQLQVREMMMVINKIPNRMNFASLQQKVEKTYNVPVAGILPLSEDMAQLGSSGIFCLQYPDHPFTQT LQKLADKVS
Sequences:
>Translated_249_residues MSKIIAIHSFRGGTGKSNLTANLAVAMALQEKRVAIVDTDLQSPGIHALFGIDKTITGKTLNDYLWNRSCIEDTACDVTS HLAISQGTVFLIPSSINADEIAKILSEGYNVSLLNTGFQRLIKELKLDYLFIDTHPGLSRETLLCIAISDLLIIILRPDR QDFQGTAVTVNIARQLQVREMMMVINKIPNRMNFASLQQKVEKTYNVPVAGILPLSEDMAQLGSSGIFCLQYPDHPFTQT LQKLADKVS >Mature_248_residues SKIIAIHSFRGGTGKSNLTANLAVAMALQEKRVAIVDTDLQSPGIHALFGIDKTITGKTLNDYLWNRSCIEDTACDVTSH LAISQGTVFLIPSSINADEIAKILSEGYNVSLLNTGFQRLIKELKLDYLFIDTHPGLSRETLLCIAISDLLIIILRPDRQ DFQGTAVTVNIARQLQVREMMMVINKIPNRMNFASLQQKVEKTYNVPVAGILPLSEDMAQLGSSGIFCLQYPDHPFTQTL QKLADKVS
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010224 - InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27491; Mature: 27360
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIAIHSFRGGTGKSNLTANLAVAMALQEKRVAIVDTDLQSPGIHALFGIDKTITGKT CCCEEEEEECCCCCCCCCCHHHHHHEEEHHCCCEEEEECCCCCCCCEEEECCCCCCCCCC LNDYLWNRSCIEDTACDVTSHLAISQGTVFLIPSSINADEIAKILSEGYNVSLLNTGFQR HHHHHCCCHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHH LIKELKLDYLFIDTHPGLSRETLLCIAISDLLIIILRPDRQDFQGTAVTVNIARQLQVRE HHHHHCCCEEEEECCCCCCHHHHHEEEECCEEEEEECCCCCCCCCCEEEEEHHHHHHHHH MMMVINKIPNRMNFASLQQKVEKTYNVPVAGILPLSEDMAQLGSSGIFCLQYPDHPFTQT HHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCEEEEECCCCHHHHH LQKLADKVS HHHHHHHCC >Mature Secondary Structure SKIIAIHSFRGGTGKSNLTANLAVAMALQEKRVAIVDTDLQSPGIHALFGIDKTITGKT CCEEEEEECCCCCCCCCCHHHHHHEEEHHCCCEEEEECCCCCCCCEEEECCCCCCCCCC LNDYLWNRSCIEDTACDVTSHLAISQGTVFLIPSSINADEIAKILSEGYNVSLLNTGFQR HHHHHCCCHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHH LIKELKLDYLFIDTHPGLSRETLLCIAISDLLIIILRPDRQDFQGTAVTVNIARQLQVRE HHHHHCCCEEEEECCCCCCHHHHHEEEECCEEEEEECCCCCCCCCCEEEEEHHHHHHHHH MMMVINKIPNRMNFASLQQKVEKTYNVPVAGILPLSEDMAQLGSSGIFCLQYPDHPFTQT HHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCEEEEECCCCHHHHH LQKLADKVS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]