| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230199
Identifier: 17230199
GI number: 17230199
Start: 3300430
End: 3302826
Strand: Reverse
Name: 17230199
Synonym: all2707
Alternate gene names: NA
Gene position: 3302826-3300430 (Counterclockwise)
Preceding gene: 17230205
Following gene: 17230198
Centisome position: 51.5
GC content: 45.26
Gene sequence:
>2397_bases ATGTTGATCACGGTGCAGGGGAAGTACGCTGTGCGAATTCCGCTAGATTACTACCGAATTTTAGGGCTACCGTTAGCGGC AAGTGATGAACAACTGCGACAAGCATACAGCGATCGCATTGTCCAATTGCCGCGACGGGAGTATTCTCAAGCAGCAATTG CTTCCCGTAAACAACTTATAGAAGAAGCTTACGTGGTTTTATCAGATCCAAAGGAACGCAGCAGTTATGACCAGCTGTAT CTTGCTCACGCCTACGACCCAGACAACGCGGCTACAACCAAAGTGGCAGTGGAAAATCGTGGGGACAGCAACAATGGTCA TTTCGATGTCCAAAGCCTGAGCATCGAAGTTTCCTCCGAGGAATTAATTGGTGCTTTATTAATTTTGCAAGAGTTGGGAG AGTATGAACTCGTACTCAAGTTAGGTCGTAATTACTTAGGTAATCAAAACGGCACAGCATCCACCAGAAATGGCAATCAT CGCACGCCTGAAGAATTTCTCGATAGTTCTGAACGTCCAGATATTCTCTTGACTGTTGCTTTGGCCTCATTAGAATTAGG GCGGGAACAATGGCAACAAGGCCACTATGAAAACGCTGCTTTGTCTTTAGAGACTGGGCAAGAAGTGCTGTTTAGTGAAG GCATCTTCCCCAGCGTCCAGGCAGAAATTCAGGCTGATCTTTACAAATTACGCCCTTATAGAATTTTAGAATTACTTGCC TTACCCCAGGAAAAAACCATTGAACGCCACCAAGGGCTGGATCTATTACAAAGCATCTTAGACGATCGCGGTGGCATTGA TGGTACAGGCAATGATCAATCAGGCTTAAACATTGATGACTTCCTCCGATTCATCCAGCAATTACGCCACCACTTAACAG TGGCTGAACAACATAAGTTGTTTGATGGTGAAAGCAAACGCCCTTCGGCTGTGGCTACATACTTAGCTGTTTATGCTTCC ATCGCCAGAGGATTCACCCAACGCCAGCCCGCTTTAATTCGTCATGCCAAGCAAATTCTGATGCGTTTGTCTAAGCGGCA AGATGTGCATTTAGAGCAGTCCCTGTGTGCGCTATTACTAGGGCAAACTGAAGAAGCCACGCGAGTTTTAGAACTGAGCC AAGAATACGAAGCTTTAGCCTTAATTCGAGAAAAATCTCAAGATTCACCCGATTTACTGCCAGGTTTGTGCTTATATGCC GAACAATGGCTGCAAAATGAAGTTTTCCCCCATTTCCGCGATTTGTCCAGACAGCAAGCTTCCCTGAAAGATTACTTTGC TAATCAACAAGTACAAGCGTATTTAGAAGCCTTGCCCAACGACGCGGAAACCACTAATGAATGGGCTGTAATTAACCGCC AATCGTTTTCTCAACCCAGGGGCAATTCTTACTCTGGAGGAACGCCAGTCGCCAAACGTCCCGTAGGGAAGGCGAACAGG CCAGGAGAAGCGTCCACAAGACCAGTTCCCCAACGTAGTCATCCATCAGAAGTAAATCGGCAGTTTCATCAAAACAGAAC CCCTGATCCCGAATTACCAGAAACATCAAACCACAGAAGACCAGAGTCTTCAAATTTTACAACTGCTAGAGAAAATATAT CGACCACAGATGCTTACACTGACAATTATCCACCAGAGATCCCTGTAGAACGCGCCAGCAGACCTGTTCAGCCGGGGGTA AGTGGTTATACCCAATCGACCCCTCCACGGCAAACTCCTAAACGCAGGAGACGCAAGAAGCCACAGGCAGTTGTCAACAG AGGACACAGTATTCATCAGCAACGCCAACCCTCACCTAGCACTCTAGGCCGGAAAACAAGATTACTTTGGATAGTTTTGG GTTCTTTGGGTGGGATATTATTGTTCTGGCTGATAGTCTCAACGACTTTTGGGTGGTTAAAGAATGTATTCTTCCCAGCA CCATCTTTACAAGGTGAGCAATTATCGATTCAGATTAGTCAACCACCTTTAGAGATTCCTGACAAAAATGCCCAGATACA ATCCCCAGAGGTGAGTCTCACAGAAGAAACGGCAAGGAAAATAATTGAAAATTGGTTGGCTACCAAAGCTAGTGCTTTAG GCGCTGAACATAAAATTGAGAGTTTAAACGAGATTTTAACTGGTTCAGCGTTATCTCAATGGCGGCTAATTGCCTTGCAA GATAAAGCAGACAATCGTCATCGAGAATACAGTCATAGTGTCAAGGTAGACTCCATCAGTAAATCTGACATAGATCCCAA TCGTGCAAGTGTGGGGGCTACAGTCAGAGAGTTAACCCAATTTTATGAGAATGGGCAAAAAGGGAAGTCTTCTGACGAAA GATTACGTGTACGCTATGAATTGATTCGACAAGATGATATTTGGCGGATTCAGAGGATGTCAGCCGCTATAAATTAA
Upstream 100 bases:
>100_bases TAATTGTTGCAATATACACTTATAGTGTAAGTTCACCACGGTATTATTCACCGTATGATTATGGCACGGTTTTACAAGCC TGGAATGGTCTAGGTGAATT
Downstream 100 bases:
>100_bases GTATGAATTTTTATATCTAAATCAACTAAACTCAAGTTGTCTGTCTCTAGCGACAATTGGTAATTCGGAATGAAGAAAGT CAGATTTATCTGGGTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 798; Mature: 798
Protein sequence:
>798_residues MLITVQGKYAVRIPLDYYRILGLPLAASDEQLRQAYSDRIVQLPRREYSQAAIASRKQLIEEAYVVLSDPKERSSYDQLY LAHAYDPDNAATTKVAVENRGDSNNGHFDVQSLSIEVSSEELIGALLILQELGEYELVLKLGRNYLGNQNGTASTRNGNH RTPEEFLDSSERPDILLTVALASLELGREQWQQGHYENAALSLETGQEVLFSEGIFPSVQAEIQADLYKLRPYRILELLA LPQEKTIERHQGLDLLQSILDDRGGIDGTGNDQSGLNIDDFLRFIQQLRHHLTVAEQHKLFDGESKRPSAVATYLAVYAS IARGFTQRQPALIRHAKQILMRLSKRQDVHLEQSLCALLLGQTEEATRVLELSQEYEALALIREKSQDSPDLLPGLCLYA EQWLQNEVFPHFRDLSRQQASLKDYFANQQVQAYLEALPNDAETTNEWAVINRQSFSQPRGNSYSGGTPVAKRPVGKANR PGEASTRPVPQRSHPSEVNRQFHQNRTPDPELPETSNHRRPESSNFTTARENISTTDAYTDNYPPEIPVERASRPVQPGV SGYTQSTPPRQTPKRRRRKKPQAVVNRGHSIHQQRQPSPSTLGRKTRLLWIVLGSLGGILLFWLIVSTTFGWLKNVFFPA PSLQGEQLSIQISQPPLEIPDKNAQIQSPEVSLTEETARKIIENWLATKASALGAEHKIESLNEILTGSALSQWRLIALQ DKADNRHREYSHSVKVDSISKSDIDPNRASVGATVRELTQFYENGQKGKSSDERLRVRYELIRQDDIWRIQRMSAAIN
Sequences:
>Translated_798_residues MLITVQGKYAVRIPLDYYRILGLPLAASDEQLRQAYSDRIVQLPRREYSQAAIASRKQLIEEAYVVLSDPKERSSYDQLY LAHAYDPDNAATTKVAVENRGDSNNGHFDVQSLSIEVSSEELIGALLILQELGEYELVLKLGRNYLGNQNGTASTRNGNH RTPEEFLDSSERPDILLTVALASLELGREQWQQGHYENAALSLETGQEVLFSEGIFPSVQAEIQADLYKLRPYRILELLA LPQEKTIERHQGLDLLQSILDDRGGIDGTGNDQSGLNIDDFLRFIQQLRHHLTVAEQHKLFDGESKRPSAVATYLAVYAS IARGFTQRQPALIRHAKQILMRLSKRQDVHLEQSLCALLLGQTEEATRVLELSQEYEALALIREKSQDSPDLLPGLCLYA EQWLQNEVFPHFRDLSRQQASLKDYFANQQVQAYLEALPNDAETTNEWAVINRQSFSQPRGNSYSGGTPVAKRPVGKANR PGEASTRPVPQRSHPSEVNRQFHQNRTPDPELPETSNHRRPESSNFTTARENISTTDAYTDNYPPEIPVERASRPVQPGV SGYTQSTPPRQTPKRRRRKKPQAVVNRGHSIHQQRQPSPSTLGRKTRLLWIVLGSLGGILLFWLIVSTTFGWLKNVFFPA PSLQGEQLSIQISQPPLEIPDKNAQIQSPEVSLTEETARKIIENWLATKASALGAEHKIESLNEILTGSALSQWRLIALQ DKADNRHREYSHSVKVDSISKSDIDPNRASVGATVRELTQFYENGQKGKSSDERLRVRYELIRQDDIWRIQRMSAAIN >Mature_798_residues MLITVQGKYAVRIPLDYYRILGLPLAASDEQLRQAYSDRIVQLPRREYSQAAIASRKQLIEEAYVVLSDPKERSSYDQLY LAHAYDPDNAATTKVAVENRGDSNNGHFDVQSLSIEVSSEELIGALLILQELGEYELVLKLGRNYLGNQNGTASTRNGNH RTPEEFLDSSERPDILLTVALASLELGREQWQQGHYENAALSLETGQEVLFSEGIFPSVQAEIQADLYKLRPYRILELLA LPQEKTIERHQGLDLLQSILDDRGGIDGTGNDQSGLNIDDFLRFIQQLRHHLTVAEQHKLFDGESKRPSAVATYLAVYAS IARGFTQRQPALIRHAKQILMRLSKRQDVHLEQSLCALLLGQTEEATRVLELSQEYEALALIREKSQDSPDLLPGLCLYA EQWLQNEVFPHFRDLSRQQASLKDYFANQQVQAYLEALPNDAETTNEWAVINRQSFSQPRGNSYSGGTPVAKRPVGKANR PGEASTRPVPQRSHPSEVNRQFHQNRTPDPELPETSNHRRPESSNFTTARENISTTDAYTDNYPPEIPVERASRPVQPGV SGYTQSTPPRQTPKRRRRKKPQAVVNRGHSIHQQRQPSPSTLGRKTRLLWIVLGSLGGILLFWLIVSTTFGWLKNVFFPA PSLQGEQLSIQISQPPLEIPDKNAQIQSPEVSLTEETARKIIENWLATKASALGAEHKIESLNEILTGSALSQWRLIALQ DKADNRHREYSHSVKVDSISKSDIDPNRASVGATVRELTQFYENGQKGKSSDERLRVRYELIRQDDIWRIQRMSAAIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90126; Mature: 90126
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITVQGKYAVRIPLDYYRILGLPLAASDEQLRQAYSDRIVQLPRREYSQAAIASRKQLI CEEEEECCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EEAYVVLSDPKERSSYDQLYLAHAYDPDNAATTKVAVENRGDSNNGHFDVQSLSIEVSSE HHHHHHCCCCHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECHH ELIGALLILQELGEYELVLKLGRNYLGNQNGTASTRNGNHRTPEEFLDSSERPDILLTVA HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEHHH LASLELGREQWQQGHYENAALSLETGQEVLFSEGIFPSVQAEIQADLYKLRPYRILELLA HHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH LPQEKTIERHQGLDLLQSILDDRGGIDGTGNDQSGLNIDDFLRFIQQLRHHLTVAEQHKL CCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FDGESKRPSAVATYLAVYASIARGFTQRQPALIRHAKQILMRLSKRQDVHLEQSLCALLL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GQTEEATRVLELSQEYEALALIREKSQDSPDLLPGLCLYAEQWLQNEVFPHFRDLSRQQA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SLKDYFANQQVQAYLEALPNDAETTNEWAVINRQSFSQPRGNSYSGGTPVAKRPVGKANR HHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCC PGEASTRPVPQRSHPSEVNRQFHQNRTPDPELPETSNHRRPESSNFTTARENISTTDAYT CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC DNYPPEIPVERASRPVQPGVSGYTQSTPPRQTPKRRRRKKPQAVVNRGHSIHQQRQPSPS CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHCCCCHH TLGRKTRLLWIVLGSLGGILLFWLIVSTTFGWLKNVFFPAPSLQGEQLSIQISQPPLEIP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC DKNAQIQSPEVSLTEETARKIIENWLATKASALGAEHKIESLNEILTGSALSQWRLIALQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHEEEEEEE DKADNRHREYSHSVKVDSISKSDIDPNRASVGATVRELTQFYENGQKGKSSDERLRVRYE CCCCCHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LIRQDDIWRIQRMSAAIN HHCCCHHHHHHHHHHHCC >Mature Secondary Structure MLITVQGKYAVRIPLDYYRILGLPLAASDEQLRQAYSDRIVQLPRREYSQAAIASRKQLI CEEEEECCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EEAYVVLSDPKERSSYDQLYLAHAYDPDNAATTKVAVENRGDSNNGHFDVQSLSIEVSSE HHHHHHCCCCHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECHH ELIGALLILQELGEYELVLKLGRNYLGNQNGTASTRNGNHRTPEEFLDSSERPDILLTVA HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEHHH LASLELGREQWQQGHYENAALSLETGQEVLFSEGIFPSVQAEIQADLYKLRPYRILELLA HHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH LPQEKTIERHQGLDLLQSILDDRGGIDGTGNDQSGLNIDDFLRFIQQLRHHLTVAEQHKL CCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FDGESKRPSAVATYLAVYASIARGFTQRQPALIRHAKQILMRLSKRQDVHLEQSLCALLL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GQTEEATRVLELSQEYEALALIREKSQDSPDLLPGLCLYAEQWLQNEVFPHFRDLSRQQA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH SLKDYFANQQVQAYLEALPNDAETTNEWAVINRQSFSQPRGNSYSGGTPVAKRPVGKANR HHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCC PGEASTRPVPQRSHPSEVNRQFHQNRTPDPELPETSNHRRPESSNFTTARENISTTDAYT CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC DNYPPEIPVERASRPVQPGVSGYTQSTPPRQTPKRRRRKKPQAVVNRGHSIHQQRQPSPS CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHCCCCHH TLGRKTRLLWIVLGSLGGILLFWLIVSTTFGWLKNVFFPAPSLQGEQLSIQISQPPLEIP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC DKNAQIQSPEVSLTEETARKIIENWLATKASALGAEHKIESLNEILTGSALSQWRLIALQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHEEEEEEE DKADNRHREYSHSVKVDSISKSDIDPNRASVGATVRELTQFYENGQKGKSSDERLRVRYE CCCCCHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LIRQDDIWRIQRMSAAIN HHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA