| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230181
Identifier: 17230181
GI number: 17230181
Start: 3280875
End: 3281312
Strand: Reverse
Name: 17230181
Synonym: all2689
Alternate gene names: NA
Gene position: 3281312-3280875 (Counterclockwise)
Preceding gene: 17230182
Following gene: 17230180
Centisome position: 51.16
GC content: 40.64
Gene sequence:
>438_bases ATGGCAATTAAGAAAAGTGAACTATATAGTTCGTTATGGAAAAGCTGTGATGAACTGCGGGGTGGTATGGATGCCTCGCA GTATAAGGATTATGTACTGGTTTTATTGTTCGTTAAATATGTATCTGATAAATACGCTGGTGTCGCAGATGTGCTGATTG AAGTGCCTGAAGGTGGCGGATTTCAGGATATTGTGGCGCTAAAAGGACAGAAAGATATCGGGGATGGTATCAACAAAATT ATTACCAATTTAGCCGAAGCCAATGATTTAAAGGGTGTCATTGATGTCGCTGATTTCAATAATGCCGACAAGCTGGGTAA GGGTAAGGAAATGCAGGATAGGCTTTCCAACTTGGTGGCGATTTTTGAAACCCCTGCTTTGAATTTTAGTAAGAATCGTG CTGATGGTGATGATATTTTAGGCGATGCCTATGAGTAA
Upstream 100 bases:
>100_bases GGTTCTTTGCACGATGTAAAAACTTCAAGGCAAAGTGTCAGACGGGCTTGAGAACGTCTGGCAAAGTTGATCGGGGGAGG TCTTTTAAAGGCTACACGAA
Downstream 100 bases:
>100_bases CTGATGCGGAACTTTGCGACACAATCAGGTAAAAGCAAGGGTCAATTTTATACTCCGGCGGAAGTTTCCCGTGTCATCTC TCAAGTTATTGGGGTTAATT
Product: type I restriction enzyme, modification chain
Products: NA
Alternate protein names: Type I Restriction M Protein; N-6 DNA Methylase; Type I Restriction- System Specificity Subunit; Type I Restriction- System Subunit M; N-6 DNA Methylase Family; Type I Restriction- System Methyltransferase Subunit; Type I Restriction- System; DNA Restriction- System DNA Methylase; Type I Restriction- Subunit M; Type I Restriction System Protein; Type I Restriction Chain; Type I Restriction- System Modification Subunit; Protein Of Type I Restriction-Modification System
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MAIKKSELYSSLWKSCDELRGGMDASQYKDYVLVLLFVKYVSDKYAGVADVLIEVPEGGGFQDIVALKGQKDIGDGINKI ITNLAEANDLKGVIDVADFNNADKLGKGKEMQDRLSNLVAIFETPALNFSKNRADGDDILGDAYE
Sequences:
>Translated_145_residues MAIKKSELYSSLWKSCDELRGGMDASQYKDYVLVLLFVKYVSDKYAGVADVLIEVPEGGGFQDIVALKGQKDIGDGINKI ITNLAEANDLKGVIDVADFNNADKLGKGKEMQDRLSNLVAIFETPALNFSKNRADGDDILGDAYE >Mature_144_residues AIKKSELYSSLWKSCDELRGGMDASQYKDYVLVLLFVKYVSDKYAGVADVLIEVPEGGGFQDIVALKGQKDIGDGINKII TNLAEANDLKGVIDVADFNNADKLGKGKEMQDRLSNLVAIFETPALNFSKNRADGDDILGDAYE
Specific function: Unknown
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15829; Mature: 15698
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKKSELYSSLWKSCDELRGGMDASQYKDYVLVLLFVKYVSDKYAGVADVLIEVPEGGG CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCC FQDIVALKGQKDIGDGINKIITNLAEANDLKGVIDVADFNNADKLGKGKEMQDRLSNLVA HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHCCCCCHHHHHHHHHHH IFETPALNFSKNRADGDDILGDAYE HHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AIKKSELYSSLWKSCDELRGGMDASQYKDYVLVLLFVKYVSDKYAGVADVLIEVPEGGG CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCC FQDIVALKGQKDIGDGINKIITNLAEANDLKGVIDVADFNNADKLGKGKEMQDRLSNLVA HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHCCCCCHHHHHHHHHHH IFETPALNFSKNRADGDDILGDAYE HHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA