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The map label for this gene is 17230176

Identifier: 17230176

GI number: 17230176

Start: 3276293

End: 3276832

Strand: Reverse

Name: 17230176

Synonym: all2684

Alternate gene names: NA

Gene position: 3276832-3276293 (Counterclockwise)

Preceding gene: 17230177

Following gene: 17230173

Centisome position: 51.09

GC content: 45.56

Gene sequence:

>540_bases
ATGAGCAAGGTCGGACAACGCGAACGCCAAACCCAAAACCGCATTGTGCAACTATTCCAGCAACAATTAAAATATCGCTA
TCTGGGTGATTGGCACGACCGACCTAACAACAGCAACATCGAAACGGAAATCCTCAGCACCTTCCTACGCGACAAACAAG
GCTACAGCAACAGCCTGATCACCAAAGCCTTGTATGAACTCAACAAAGTCGCAGGCGATCAAAGCAAAAGCCTTTATGAC
ATCAACAAACAAGTTTATAGCCTCCTGCGCTATGGGGTTAATGTCAAAGAAGAAGTTGGCGAGAACACCCAAACCGTTTG
GCTGATCAACTGGGAAAAACCCCTAGAAAATGATTTTGCGATCGCCGAAGAAGTCACAGTCAAAGGCGAAAACACCAAAC
GCCCAGATATCGTACTTTATGTTAATGGTATTGCGATCGGTGTACTCGAACTTAAACGCAGCACCGTTTCCGTCTCTGAA
GGCATCCGCCAAAACCTAGATAACCAAAAATCACGCCATGTGCGACTTAATATTCTGTAA

Upstream 100 bases:

>100_bases
GAAAATTCACGGATGACACAAATAGAGATGACATAGTTTGATTAACAGTGTCATATTTAAAGCTGAGTAAATCCGTGATT
ATCACAGTGAGAGAGTTGCT

Downstream 100 bases:

>100_bases
CAAGATCGTCGAACTGAAGAGGGTCACAATTGTGGCGATTAAGCCAGAAACAGACGGTATGAGCTAAAATCTTGCGATTG
AGCCGACTGGTAAGATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: HsdR Family Type I Site-Specific Deoxyribonuclease; Type I Restriction- System Restriction Subunit; Type I Restriction R Protein; Type I Restriction- System R Subunit; Type I Site-Specific Deoxyribonuclease HsdR; Type I Restriction Restriction Subunit; Ribosomal /L; Type I Restriction- System; DNA Restriction- System Restriction; Type I Restriction Protein; Type I Restriction R Subunit; Type I Restriction; Type I Restriction Subunit R; Type I Restriction- Restriction Subunit; Type I Site-Specific Deoxyribonuclease; Type I Restriction- System Protein Restriction Subunit

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSKVGQRERQTQNRIVQLFQQQLKYRYLGDWHDRPNNSNIETEILSTFLRDKQGYSNSLITKALYELNKVAGDQSKSLYD
INKQVYSLLRYGVNVKEEVGENTQTVWLINWEKPLENDFAIAEEVTVKGENTKRPDIVLYVNGIAIGVLELKRSTVSVSE
GIRQNLDNQKSRHVRLNIL

Sequences:

>Translated_179_residues
MSKVGQRERQTQNRIVQLFQQQLKYRYLGDWHDRPNNSNIETEILSTFLRDKQGYSNSLITKALYELNKVAGDQSKSLYD
INKQVYSLLRYGVNVKEEVGENTQTVWLINWEKPLENDFAIAEEVTVKGENTKRPDIVLYVNGIAIGVLELKRSTVSVSE
GIRQNLDNQKSRHVRLNIL
>Mature_178_residues
SKVGQRERQTQNRIVQLFQQQLKYRYLGDWHDRPNNSNIETEILSTFLRDKQGYSNSLITKALYELNKVAGDQSKSLYDI
NKQVYSLLRYGVNVKEEVGENTQTVWLINWEKPLENDFAIAEEVTVKGENTKRPDIVLYVNGIAIGVLELKRSTVSVSEG
IRQNLDNQKSRHVRLNIL

Specific function: Unknown

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20756; Mature: 20625

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVGQRERQTQNRIVQLFQQQLKYRYLGDWHDRPNNSNIETEILSTFLRDKQGYSNSLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
TKALYELNKVAGDQSKSLYDINKQVYSLLRYGVNVKEEVGENTQTVWLINWEKPLENDFA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCH
IAEEVTVKGENTKRPDIVLYVNGIAIGVLELKRSTVSVSEGIRQNLDNQKSRHVRLNIL
HHHHEEECCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SKVGQRERQTQNRIVQLFQQQLKYRYLGDWHDRPNNSNIETEILSTFLRDKQGYSNSLI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
TKALYELNKVAGDQSKSLYDINKQVYSLLRYGVNVKEEVGENTQTVWLINWEKPLENDFA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCH
IAEEVTVKGENTKRPDIVLYVNGIAIGVLELKRSTVSVSEGIRQNLDNQKSRHVRLNIL
HHHHEEECCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA