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The map label for this gene is yjcR [C]

Identifier: 17230144

GI number: 17230144

Start: 3205740

End: 3206930

Strand: Reverse

Name: yjcR [C]

Synonym: all2652

Alternate gene names: 17230144

Gene position: 3206930-3205740 (Counterclockwise)

Preceding gene: 17230145

Following gene: 17230143

Centisome position: 50.0

GC content: 38.87

Gene sequence:

>1191_bases
GTGTTTTGGTTAGGTTTTAAGTTCATGAAAAAATGGTGTAACTTAACAATTATTTTGGGCTTGTTGAGTCTATCTACAGC
TTGTACAACATCACAGGCGAATATTAATTCTACTGCTCAAATTGCAGTCGAACCTGCACCTGTGACTGCTGTAATTGCAC
TGGGACAAATTGAACCAGAAGGAGAAGTAATTAAACTTTCTGTTCCTAATGCTCAAGATAGTCGAGTTAACCAAATTTTG
GTAAAGGAAGGGGATTTTGTTAAAACCAATCAAGTTATCGCAATTTTACAAGGAATTGACCAATTAGAAGCAGATTTACG
CGATGCCGAGGCTAATGTACGCTTGCATGAGGCGGAACTTTTAAAGGTTGAACAAGGTGAAGCGAAACAAGGGGAAATGG
CTGCACAAAGGGCTACTATTGCTCGTTTAGAAGCGCAGTTGAAAGCAGAAACTACCCAAAAGCAAGCAGCTATAAATAGT
GCAGAAGCAACCCTACAAGAAGCACAATTAACTTATCAACGTCGCCAAGATTTATCTACTGAAGGTGCTATTTCAATTGC
AGATGCAGACACAGCTAAAAGAGAATTAGCTACGGCTGAAGCTACCTTGATGGAACGCCAAGCAGAATTAGAGAAAACTA
TCACGACTTTACAAGCACAAATTACTCAAGAAGAGGCGACATTAGCACAATTAAAAGAAATTCGTCCCGTAGATGTCAGA
ATTTCTAAAGTGCATTTAGAGAAAGCTAAAATCGCTGTCATTCAAAGAAAAGCTCAGTTAGAAAATGCCAAAGTCCGCGC
TCCTTCTGCTGGTCAAATATTAAAAATAAATACTCGTATTGGTGAGCAGGTAAATACAAATCAAGGAATTGTCGAAATTG
CTCAAACTAACCAAATGTTTGCTGTAGCTGAAGTAGCGGAAACTGATATTGATAAAGTGCGTCGAGGACAAAAGGCAATT
ATTAGCAGCGAGTATGGCGGTTTTAGCGGTGAAATTAAAGGTACTGTTGAACAGATTGCTTTACAAATTGGTAAAAGGAC
TCTGCAAAATGCAGCTAATACAAGAGGCCCTACAACGGATGATAATTCACGGGTGATTGCTGTTAAGGTGCGAATTGACC
CTAAGTATAATTCTAAAATTGCTGCTTTAACTTATATGTTGGTAAGGGTAAAGATTGATATTGGGGGGTAG

Upstream 100 bases:

>100_bases
TGCAAGATTACGATTTGGTGATGGCAAGTCTACCATTTGTCAATCAATTAAAGCTGATGCAGGAAAATAAAAAATCAATG
GTTGGTGTAAGGGTGTAGGG

Downstream 100 bases:

>100_bases
TTTTTTGGAGTTTTAAACGCGGAGGGGCGCAAAGGGTTAGTTAAGGTTTTTATTGAGTATACTAAGAATTGTTAATGTTA
TATATTTTTAAAAAAGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: DevB Family ABC Exporter Membrane Fusion Protein; ABC Transporter; DevB-Like Secretion Protein; Secretion Protein HlyD; Secretion Protein HlyD Family Protein; ABC-Transporter Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Transporter MFP Family; Multidrug Resistance Secretion Protein; Membrane Fusion Protein Family Protein; Glycolipid ABC Transporter Membrane Protein; ABC-Transporter DevB Family Protein; Secretion Protein HlyD Family Protein DevB; Membrane-Fusion Protein; Multidrug Resistance Efflux Pump-Like; Membrane Fusion Protein; ABC-Transporter DevB-Like Protein; DevB-Like ABC Transporter Membrane Fusion Protein; ABC-Transporter DevB-Like-Protein; ABC-Transporter Component; ABC Transporter Component; ABC Transporter Component-Like; Membrane Fusion Protein DevB; RTX Secretion Protein D; Permease Protein DevB-Like Protein

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MFWLGFKFMKKWCNLTIILGLLSLSTACTTSQANINSTAQIAVEPAPVTAVIALGQIEPEGEVIKLSVPNAQDSRVNQIL
VKEGDFVKTNQVIAILQGIDQLEADLRDAEANVRLHEAELLKVEQGEAKQGEMAAQRATIARLEAQLKAETTQKQAAINS
AEATLQEAQLTYQRRQDLSTEGAISIADADTAKRELATAEATLMERQAELEKTITTLQAQITQEEATLAQLKEIRPVDVR
ISKVHLEKAKIAVIQRKAQLENAKVRAPSAGQILKINTRIGEQVNTNQGIVEIAQTNQMFAVAEVAETDIDKVRRGQKAI
ISSEYGGFSGEIKGTVEQIALQIGKRTLQNAANTRGPTTDDNSRVIAVKVRIDPKYNSKIAALTYMLVRVKIDIGG

Sequences:

>Translated_396_residues
MFWLGFKFMKKWCNLTIILGLLSLSTACTTSQANINSTAQIAVEPAPVTAVIALGQIEPEGEVIKLSVPNAQDSRVNQIL
VKEGDFVKTNQVIAILQGIDQLEADLRDAEANVRLHEAELLKVEQGEAKQGEMAAQRATIARLEAQLKAETTQKQAAINS
AEATLQEAQLTYQRRQDLSTEGAISIADADTAKRELATAEATLMERQAELEKTITTLQAQITQEEATLAQLKEIRPVDVR
ISKVHLEKAKIAVIQRKAQLENAKVRAPSAGQILKINTRIGEQVNTNQGIVEIAQTNQMFAVAEVAETDIDKVRRGQKAI
ISSEYGGFSGEIKGTVEQIALQIGKRTLQNAANTRGPTTDDNSRVIAVKVRIDPKYNSKIAALTYMLVRVKIDIGG
>Mature_396_residues
MFWLGFKFMKKWCNLTIILGLLSLSTACTTSQANINSTAQIAVEPAPVTAVIALGQIEPEGEVIKLSVPNAQDSRVNQIL
VKEGDFVKTNQVIAILQGIDQLEADLRDAEANVRLHEAELLKVEQGEAKQGEMAAQRATIARLEAQLKAETTQKQAAINS
AEATLQEAQLTYQRRQDLSTEGAISIADADTAKRELATAEATLMERQAELEKTITTLQAQITQEEATLAQLKEIRPVDVR
ISKVHLEKAKIAVIQRKAQLENAKVRAPSAGQILKINTRIGEQVNTNQGIVEIAQTNQMFAVAEVAETDIDKVRRGQKAI
ISSEYGGFSGEIKGTVEQIALQIGKRTLQNAANTRGPTTDDNSRVIAVKVRIDPKYNSKIAALTYMLVRVKIDIGG

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790519, Length=254, Percent_Identity=29.1338582677165, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43215; Mature: 43215

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWLGFKFMKKWCNLTIILGLLSLSTACTTSQANINSTAQIAVEPAPVTAVIALGQIEPE
CCEECHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC
GEVIKLSVPNAQDSRVNQILVKEGDFVKTNQVIAILQGIDQLEADLRDAEANVRLHEAEL
CCEEEEECCCCCCCHHHEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHE
LKVEQGEAKQGEMAAQRATIARLEAQLKAETTQKQAAINSAEATLQEAQLTYQRRQDLST
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGAISIADADTAKRELATAEATLMERQAELEKTITTLQAQITQEEATLAQLKEIRPVDVR
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ISKVHLEKAKIAVIQRKAQLENAKVRAPSAGQILKINTRIGEQVNTNQGIVEIAQTNQMF
EEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCCCCCCCEEEEECCCCEE
AVAEVAETDIDKVRRGQKAIISSEYGGFSGEIKGTVEQIALQIGKRTLQNAANTRGPTTD
EEHHHHHCCHHHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DNSRVIAVKVRIDPKYNSKIAALTYMLVRVKIDIGG
CCCEEEEEEEEECCCCCCHHHHHEEEEEEEEEEECC
>Mature Secondary Structure
MFWLGFKFMKKWCNLTIILGLLSLSTACTTSQANINSTAQIAVEPAPVTAVIALGQIEPE
CCEECHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC
GEVIKLSVPNAQDSRVNQILVKEGDFVKTNQVIAILQGIDQLEADLRDAEANVRLHEAEL
CCEEEEECCCCCCCHHHEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHE
LKVEQGEAKQGEMAAQRATIARLEAQLKAETTQKQAAINSAEATLQEAQLTYQRRQDLST
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGAISIADADTAKRELATAEATLMERQAELEKTITTLQAQITQEEATLAQLKEIRPVDVR
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ISKVHLEKAKIAVIQRKAQLENAKVRAPSAGQILKINTRIGEQVNTNQGIVEIAQTNQMF
EEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCCCCCCCCEEEEECCCCEE
AVAEVAETDIDKVRRGQKAIISSEYGGFSGEIKGTVEQIALQIGKRTLQNAANTRGPTTD
EEHHHHHCCHHHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DNSRVIAVKVRIDPKYNSKIAALTYMLVRVKIDIGG
CCCEEEEEEEEECCCCCCHHHHHEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA